Parental gene: | RGD1359158, ENSRNOG00000027161 |
| Aliases: | None |
| Description: | None |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:246496969..246553306(-) |
>ENSRNOG00000027161
ATGAGTTCCCAGAAAGGCAACGTGACTCGGTCCCGGCCTCAGAAGCACCAGAATACGTTCACCTTCAAAAATGACAAGTT
TGATAAGAGTGTTCAGACCAAGAAAATTAATGCAAAACTTCATGATGGAGTATGTCAGCGTTGCAAAGAAGTTCTTGAAT
GGCGTGTAAAATACAGCAAATACAAACCACTGTCAAAGCCTAAGAAATGTGTTAAATGTTTACAGAAGACAGTAAAGGAC
TCTTACCACATAATGTGTAGACCATGTGCCTGCAAACTTGAAGTTTGTGCAAAATGTGGAAAGGAAGAAGAAATTGTTAT
TCCGTTTAATAAAGAACCAGAACCTTCAGAAAATACTGAAAGTGAAGGTTCCAACCATAGAAGAAGCTGCAAACGGAAGG
AAGACAGTGATGAGGACTTAGATGCTGAGTCTGACTCAGAGGGCGAGGATGAGGACACTCAGGCCTGA
ATGAGTTCCCAGAAAGGCAACGTGACTCGGTCCCGGCCTCAGAAGCACCAGAATACGTTCACCTTCAAAAATGACAAGTT
TGATAAGAGTGTTCAGACCAAGAAAATTAATGCAAAACTTCATGATGGAGTATGTCAGCGTTGCAAAGAAGTTCTTGAAT
GGCGTGTAAAATACAGCAAATACAAACCACTGTCAAAGCCTAAGAAATGTGTTAAATGTTTACAGAAGACAGTAAAGGAC
TCTTACCACATAATGTGTAGACCATGTGCCTGCAAACTTGAAGTTTGTGCAAAATGTGGAAAGGAAGAAGAAATTGTTAT
TCCGTTTAATAAAGAACCAGAACCTTCAGAAAATACTGAAAGTGAAGGTTCCAACCATAGAAGAAGCTGCAAACGGAAGG
AAGACAGTGATGAGGACTTAGATGCTGAGTCTGACTCAGAGGGCGAGGATGAGGACACTCAGGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .08 RPM |
| SRP017611_kidney | 4 .54 RPM |
| SRP017611_brain | 5 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000007254 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000006831 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000001820 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000001441 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000025848 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000031942 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000155621 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024309 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018881 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008971 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000035171 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001023 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000024578 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000011302 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029745 | possible_ortholog | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000021018 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000004523 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000015556 | ortholog_one2one | 6 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1898 | 90.48 | 80.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_2010 | 57.78 | 86.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2242 | 99.35 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_2859 | 87.20 | 80.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_2960 | 60.22 | 59.35 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000027161 retrocopies