Parental gene: | Ahcy, ENSRNOG00000017777 |
| Aliases: | None |
| Description: | Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P10760] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 3:156957239..156972458(-) |
>ENSRNOG00000017777
ATGGCTGATAAACTGCCCTACAAAGTCGCGGACATTGGACTGGCTGCCTGGGGACGGAAGGCCCTGGACATAGCTGAGAA
CGAGATGCCAGGTTTGATGCGCATGCGGGAGATGTACTCAGCCTCCAAGCCACTGAAGGGCGCTCGCATTGCTGGCTGCC
TGCACATGACTGTGGAGACTGCTGTCCTCATTGAGACTCTCGTGGCCCTGGGTGCTGAGGTGCGGTGGTCCAGCTGCAAC
ATCTTCTCCACTCAGGACCATGCAGCGGCTGCCATTGCCAAGGCTGGCATTCCAGTGTTTGCCTGGAAGGGAGAGACGGA
TGAAGAGTACCTGTGGTGCATTGAGCAGACGTTGCACTTCAAGGACGGACCCCTCAACATGATTCTGGATGATGGCGGTG
ACCTTACTAACCTCATCCACACCAAACACCCACAGCTTCTGTCAGGCATCCGAGGTATCTCTGAGGAGACCACAACTGGC
GTCCACAACCTCTACAAGATGATGGCCAATGGGATACTGAAGGTGCCTGCCATCAACGTCAACGATTCTGTCACCAAGAG
CAAGTTTGACAACCTCTATGGCTGCCGGGAGTCCCTCATAGATGGCATCAAACGGGCCACAGATGTGATGATTGCGGGCA
AGGTGGCAGTGGTAGCAGGCTATGGTGATGTGGGCAAGGGTTGTGCCCAGGCCCTGCGGGGTTTCGGGGCCCGAGTCATC
ATCACCGAGATTGACCCCATCAATGCACTGCAAGCTGCCATGGAGGGCTACGAGGTAACCACCATGGACGAGGCCTGTAA
GGAGGGCAACATCTTTGTGACCACCACGGGCTGTGTTGATATCATCCTTGGTCGGCACTTTGAACAGATGAAGGATGATG
CCATTGTCTGTAACATTGGACACTTCGACGTGGAGATTGATGTGAAGTGGCTCAATGAGAACGCTGTGGAGAAGGTGAAC
ATCAAGCCCCAGGTGGACCGCTACTTGCTAAAGAATGGGCACCGCATCATCTTGCTGGCTGAGGGCCGTCTGGTCAACCT
GGGTTGTGCCATGGGCCACCCCAGCTTCGTGATGAGCAACTCCTTCACAAACCAGGTGATGGCACAGATTGAGCTGTGGA
CCCACCCAGACAAATACCCCGTGGGGGTTCACTTCCTGCCTAAGAAGCTGGATGAGGCAGTGGCTGAAGCCCACCTGGGC
AAGCTGAACGTGAAGCTGACCAAGCTGACTGAGAAGCAGGCTCAGTACCTGGGCATGCCCATTAACGGCCCCTTCAAGCC
TGATCACTACCGCTACTGA
ATGGCTGATAAACTGCCCTACAAAGTCGCGGACATTGGACTGGCTGCCTGGGGACGGAAGGCCCTGGACATAGCTGAGAA
CGAGATGCCAGGTTTGATGCGCATGCGGGAGATGTACTCAGCCTCCAAGCCACTGAAGGGCGCTCGCATTGCTGGCTGCC
TGCACATGACTGTGGAGACTGCTGTCCTCATTGAGACTCTCGTGGCCCTGGGTGCTGAGGTGCGGTGGTCCAGCTGCAAC
ATCTTCTCCACTCAGGACCATGCAGCGGCTGCCATTGCCAAGGCTGGCATTCCAGTGTTTGCCTGGAAGGGAGAGACGGA
TGAAGAGTACCTGTGGTGCATTGAGCAGACGTTGCACTTCAAGGACGGACCCCTCAACATGATTCTGGATGATGGCGGTG
ACCTTACTAACCTCATCCACACCAAACACCCACAGCTTCTGTCAGGCATCCGAGGTATCTCTGAGGAGACCACAACTGGC
GTCCACAACCTCTACAAGATGATGGCCAATGGGATACTGAAGGTGCCTGCCATCAACGTCAACGATTCTGTCACCAAGAG
CAAGTTTGACAACCTCTATGGCTGCCGGGAGTCCCTCATAGATGGCATCAAACGGGCCACAGATGTGATGATTGCGGGCA
AGGTGGCAGTGGTAGCAGGCTATGGTGATGTGGGCAAGGGTTGTGCCCAGGCCCTGCGGGGTTTCGGGGCCCGAGTCATC
ATCACCGAGATTGACCCCATCAATGCACTGCAAGCTGCCATGGAGGGCTACGAGGTAACCACCATGGACGAGGCCTGTAA
GGAGGGCAACATCTTTGTGACCACCACGGGCTGTGTTGATATCATCCTTGGTCGGCACTTTGAACAGATGAAGGATGATG
CCATTGTCTGTAACATTGGACACTTCGACGTGGAGATTGATGTGAAGTGGCTCAATGAGAACGCTGTGGAGAAGGTGAAC
ATCAAGCCCCAGGTGGACCGCTACTTGCTAAAGAATGGGCACCGCATCATCTTGCTGGCTGAGGGCCGTCTGGTCAACCT
GGGTTGTGCCATGGGCCACCCCAGCTTCGTGATGAGCAACTCCTTCACAAACCAGGTGATGGCACAGATTGAGCTGTGGA
CCCACCCAGACAAATACCCCGTGGGGGTTCACTTCCTGCCTAAGAAGCTGGATGAGGCAGTGGCTGAAGCCCACCTGGGC
AAGCTGAACGTGAAGCTGACCAAGCTGACTGAGAAGCAGGCTCAGTACCTGGGCATGCCCATTAACGGCCCCTTCAAGCC
TGATCACTACCGCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 707 .88 RPM |
| SRP017611_kidney | 228 .82 RPM |
| SRP017611_brain | 31 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018101 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000007504 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018303 | ortholog_one2many | 7 retrogenes | |
| Echinops telfairi | ENSETEG00000002576 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000101444 | ortholog_one2many | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000014694 | ortholog_many2many | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000002753 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000027597 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010041 | possible_ortholog | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008592 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016787 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000010935 | ortholog_one2many | 9 retrogenes | |
| Pan troglodytes | ENSPTRG00000013414 | ortholog_one2many | 7 retrogenes | |
| Sus scrofa | ENSSSCG00000007278 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007163 | ortholog_one2many | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003632 | ortholog_one2many | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000019486 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_569 | 91.12 | 69.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_647 | 86.31 | 55.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_839 | 77.29 | 62.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_rnor_1142 | 80.61 | 67.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_rnor_1820 | 81.86 | 54.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_rnor_1903 | 80.65 | 77.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_rnor_2120 | 88.95 | 79.40 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000017777 retrocopies