Parental gene:

AHCY, ENSBTAG00000018101

Aliases:None
Description:Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:Q3MHL4]
Organism:Cow (Bos taurus)
Coordinates:13:64258559..64274274(-)


>ENSBTAG00000018101
ATGTCGGACAAGCTGCCTTACAAAGTCGCTGACATCAGCCTGGCCGCTTGGGGACGCAAGGCCCTGGACCTGGCAGAGAA
TGAGATGCCGGGCCTGATGCACATGCGAGAAATGTACTCGGCCTCCAAGCCTCTGAAGGGCGCTCGCATTGCTGGCTGCC
TGCACATGACCGTGGAGACCGCCGTCCTCATTGAGACCCTCGTTGCCCTGGGTGCTGAGGTGCGGTGGTCCAGCTGCAAT
ATCTTCTCCACCCAGGACCATGCAGCAGCTGCCATTGCCAAGGCTGGCATTCCAGTGTACGCCTGGAAGGGTGAAACGGA
TGAGGAGTACCTGTGGTGCATTGAACAGACGCTGTACTTCAAGGACGGGCCCCTCAACATGATTCTGGACGACGGTGGTG
ACCTCACCAACCTCATCCACACCAAGTACCCGCAGCTCCTGTCAGGCATCCGAGGCATCTCTGAAGAGACCACAACGGGG
GTCCACAACCTGTACAAGATGATGGCCAAAGGGATCCTGAAGGTGCCGGCCATCAATGTCAATGACTCTGTCACCAAGAG
CAAGTTTGACAACCTCTATGGCTGCCGGGAGTCCCTCATAGATGGCATCAAGCGGGCCACAGATGTCATGATTGCGGGCA
AGGTGGCGGTGGTTGCAGGCTATGGCGACGTGGGCAAGGGCTGTGCCCAGGCCCTGAGGGGATTTGGGGCCCGCGTCATC
ATCACGGAGATTGACCCCATCAACGCACTTCAAGCTGCCATGGAGGGCTACGAGGTGACCACCATGGATGAGGCCTGTCA
GGAGGGCAACATCTTTGTCACCACCACGGGCTGTACTGACATCATTCTTGGCCAGCACTTTGAACAGATGAAGGATGATG
CCATTGTGTGTAACATTGGGCACTTTGACGTGGAGATCGATGTCAAGTGGCTGAACGAGAACGCTGTGGAGAAGGTGAAC
ATCAAGCCCCAGGTGGATCGCTACTTGTTGAAGAACGGACGCCGCATCATCCTGCTGGCCGAGGGCCGGCTGGTCAACCT
GGGCTGTGCCATGGGCCATCCTAGCTTTGTGATGAGCAACTCCTTCACCAACCAGGTCCTGGCGCAGATCGAGCTCTGGA
CCCACCCAGACAAGTACCCCGTCGGAGTCCACTTCCTGCCCAAGAAGCTGGATGAAGCAGTGGCTGAAGCCCACCTGGGC
AAGCTGAATGTGAAGCTGACCAAGCTGACTGAGAAGCAGGCCCAGTACCTGGGCGTGTCCCGTGAAGGCCCGTTCAAGCC
TGATCACTACCGCTACTGA

Library Parental gene expression (RPM)
SRP017611_brain 51 .30 RPM
SRP017611_kidney 359 .25 RPM
SRP017611_liver 1012 .04 RPM
ERP005899_muscle 454 .04 RPM
ERP005899_liver 1120 .08 RPM
SRP030211_testis 32 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007504 ortholog_one2one 2 retrogenes
retro_cfam_1486, retro_cfam_552,
Echinops telfairi ENSETEG00000002576 ortholog_one2one 1 retrogene
retro_etel_444,
Gorilla gorilla ENSGGOG00000014694 possible_ortholog 5 retrogenes
retro_ggor_1148, retro_ggor_1795, retro_ggor_2822, retro_ggor_3087, retro_ggor_511,
Monodelphis domestica ENSMODG00000002753 ortholog_one2one 1 retrogene
retro_mdom_1974,
Mus musculus ENSMUSG00000027597 possible_ortholog 1 retrogene
retro_mmus_197,
Nomascus leucogenys ENSNLEG00000010041 ortholog_one2one 4 retrogenes
retro_nleu_1717, retro_nleu_2785, retro_nleu_40, retro_nleu_929,
Oryctolagus cuniculus ENSOCUG00000008592 possible_ortholog 1 retrogene
retro_ocun_1886,
Rattus norvegicus ENSRNOG00000017777 possible_ortholog 7 retrogenes
retro_rnor_1142, retro_rnor_1820, retro_rnor_1903, retro_rnor_2120, retro_rnor_569, retro_rnor_647, retro_rnor_839,
Sus scrofa ENSSSCG00000007278 ortholog_one2one 1 retrogene
retro_sscr_119,
Xenopus tropicalis ENSXETG00000019486 ortholog_one2one 1 retrogene
retro_xtro_62,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1140 67.38 52.55
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Download FASTA sequences of all ENSBTAG00000018101 retrocopies