Parental gene: | AHCY, ENSCAFG00000007504 |
| Aliases: | None |
| Description: | adenosylhomocysteinase [Source:HGNC Symbol;Acc:343] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 24:23411349..23423367(-) |
>ENSCAFG00000007504
ATGTCGGACAAACTGCCCTACAAAGTCGCTGACATCAGCCTGGCCTCCTGGGGACGCAAGGCCCTGGACATAGCAGAGAA
TGAGATGCCGGGCCTGATGCGCATGAGGGAGATGTACTCGGCCTCCAAGCCACTGAAGGGTGCCCGCATCGCTGGCTGCC
TACACATGACCGTGGAGACAGCTGTCCTCATTGAGACCCTCGTAGCCCTGGGTGCTGAGGTAGGTAAGTGGGGTAGGTGT
GTGGCAGGCACCAGTGGGGAGGGCCAGGTTCTGATGTGCTGTCCCACTCCACCTCCAGTGTATGCCTGGAAGGGTGAAAC
GGATGAGGAGTACCTGTGGTGCATTGAGCAGACACTGTACTTTAAGGATGGACCCCTCAACATGATTCTGGATGACGGAG
GTGACCTTACCAATCTCATCCACACCAAGTACCCACAGCTCCTATCAGGCATCCGAGGCATTTCTGAAGAGACCACAACA
GGGGTTCATAATCTATACAAGATGATGGCCAACGGGAAGCTGAAGGTGCCTGCCATCAATGTGAACGACTCTGTCACCAA
AAGCAAGTTTGACAACCTGTATGGCTGCCGGGAGTCTCTTATAGATGGCATCAAGCGGGCTACGGATGTGATGATTGCAG
GCAAGGTGGCAGTGGTAGCAGGCTATGGCGATGTGGGCAAAGGTTGTGCCCAGGCCCTGCGGGGTTTTGGGGCCCGCGTC
ATCATCACGGAGATCGACCCCATCAATGCACTGCAGGCTGCCATGGAGGGCTATGAGGTGACCACTATGGATGAGGCCTG
TCAGGAAGGCAATATATTTGTCACCACCACAGGCTGTGTTGACATCATCCTTGGCCGGCACTTTGAACAGATGAAAGATG
ATGCCATTGTGTGTAACATCGGACACTTTGACGTGGAGATTGACGTCAAATGGCTGAATGAAAATGCTGTAGAGAAAGTG
AACATCAAGCCCCAGGTTGACCGCTACCGGCTGAAAAATGGGCGCCGTATCATCCTGTTGGCTGAGGGCCGGCTGGTCAA
CCTGGGCTGTGCTATGGGCCATCCCAGCTTTGTGATGAGCAACTCATTCACCAATCAAGTGCTGGCACAGATAGAATTGT
GGACCCACCCAGACAAGTACTCTGTTGGGGTTCACTTCCTGCCCAAAAAGCTGGATGAAGCAGTGGCTGAAGCTCACCTG
GGTAAGCTGAATGTGAAGCTGACCAAGCTGACTGAGAAGCAGGCCCAGTACCTGGGCTTGTCCCGTGATGGCCCCTTCAA
GCCCGATCATTACCGCTACTGA
ATGTCGGACAAACTGCCCTACAAAGTCGCTGACATCAGCCTGGCCTCCTGGGGACGCAAGGCCCTGGACATAGCAGAGAA
TGAGATGCCGGGCCTGATGCGCATGAGGGAGATGTACTCGGCCTCCAAGCCACTGAAGGGTGCCCGCATCGCTGGCTGCC
TACACATGACCGTGGAGACAGCTGTCCTCATTGAGACCCTCGTAGCCCTGGGTGCTGAGGTAGGTAAGTGGGGTAGGTGT
GTGGCAGGCACCAGTGGGGAGGGCCAGGTTCTGATGTGCTGTCCCACTCCACCTCCAGTGTATGCCTGGAAGGGTGAAAC
GGATGAGGAGTACCTGTGGTGCATTGAGCAGACACTGTACTTTAAGGATGGACCCCTCAACATGATTCTGGATGACGGAG
GTGACCTTACCAATCTCATCCACACCAAGTACCCACAGCTCCTATCAGGCATCCGAGGCATTTCTGAAGAGACCACAACA
GGGGTTCATAATCTATACAAGATGATGGCCAACGGGAAGCTGAAGGTGCCTGCCATCAATGTGAACGACTCTGTCACCAA
AAGCAAGTTTGACAACCTGTATGGCTGCCGGGAGTCTCTTATAGATGGCATCAAGCGGGCTACGGATGTGATGATTGCAG
GCAAGGTGGCAGTGGTAGCAGGCTATGGCGATGTGGGCAAAGGTTGTGCCCAGGCCCTGCGGGGTTTTGGGGCCCGCGTC
ATCATCACGGAGATCGACCCCATCAATGCACTGCAGGCTGCCATGGAGGGCTATGAGGTGACCACTATGGATGAGGCCTG
TCAGGAAGGCAATATATTTGTCACCACCACAGGCTGTGTTGACATCATCCTTGGCCGGCACTTTGAACAGATGAAAGATG
ATGCCATTGTGTGTAACATCGGACACTTTGACGTGGAGATTGACGTCAAATGGCTGAATGAAAATGCTGTAGAGAAAGTG
AACATCAAGCCCCAGGTTGACCGCTACCGGCTGAAAAATGGGCGCCGTATCATCCTGTTGGCTGAGGGCCGGCTGGTCAA
CCTGGGCTGTGCTATGGGCCATCCCAGCTTTGTGATGAGCAACTCATTCACCAATCAAGTGCTGGCACAGATAGAATTGT
GGACCCACCCAGACAAGTACTCTGTTGGGGTTCACTTCCTGCCCAAAAAGCTGGATGAAGCAGTGGCTGAAGCTCACCTG
GGTAAGCTGAATGTGAAGCTGACCAAGCTGACTGAGAAGCAGGCCCAGTACCTGGGCTTGTCCCGTGATGGCCCCTTCAA
GCCCGATCATTACCGCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .11 RPM |
| SRP017611_kidney | 512 .78 RPM |
| SRP017611_liver | 299 .12 RPM |
| SRP012049_cerebellum | 24 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018101 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002576 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000014694 | possible_ortholog | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000002753 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027597 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010041 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000008592 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000017777 | possible_ortholog | 7 retrogenes | |
| Sus scrofa | ENSSSCG00000007278 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000019486 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_552 | 88.45 | 57.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1486 | 91.37 | 76.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000007504 retrocopies