Parental gene:

Nt5c3, ENSRNOG00000005981

Aliases:Nt5c3a, Nt5c3
Description:5'-nucleotidase, cytosolic III [Source:RefSeq peptide;Acc:NP_001101332]
Organism:Rat (Rattus norvegicus)
Coordinates:4:151889318..151932147(-)


>ENSRNOG00000005981
ATGACTAATCAGGAGTCTGCTGTCCGTTTGGAAATGATGCCAGAATTTCAGAAAAGCTCAGTTCGTATCAAGAACCCAAC
GAGAGTAGAAGAAATTATCTGTGGTCTCATTAAAGGAGGCGCTGCCAAACTTCAGATAATAACCGACTTTGATATGACTC
TAAGTAGGTTCTCCTACAATGGGAAAAGATGCCCAACATGTCATAATATCATTGACAACTGTAAGCTCGTTACAGATGAA
TGTCGAAGAAAGTTACTGCAGCTAAAGGAGCAGTACTACGCTATTGAGGTTGATCCTGTTCTCACCGTGGAAGAGAAGTT
CCCTTACATGGTAGAATGGTATACCAAATCGCATGGTTTGCTTATTGAACAAGGCATACCAAAAGCTAAACTTAAAGAGA
TTGTGGCTGACTCTGATGTCATGCTCAAGGAAGGATATGAGAATTTCTTCGGTAAACTTCAACAGCACGGTATCCCTGTG
TTCATATTTTCGGCTGGTATCGGTGACGTACTTGAAGAAGTTATCCGGCAGGCTGGAGTTTATCACTCAAACGTCAAAGT
AGTGTCTAACTTCATGGATTTTGATGAAAATGGAGTGCTGAAAGGATTCAAAGGAGAGCTAATTCATGTATTCAACAAAC
ATGATGGTGCCCTGAAGAATACAGACTACTTCAGCCAACTGAAAGACAACAGCAACATCATTCTGCTGGGGGACTCCCAA
GGAGACTTAAGGATGGCCGATGGTGTAGCCAACGTCGAACACATTCTGAAAATTGGTTATCTGAATGACAGAGTAGACGA
GCTTTTAGAAAAATACATGGACTCTTATGATATTGTTTTAGTAAAAGAAGAATCACTGGAGGTTGTCAACTCTATTTTAC
AGAAGACATTATAA

Library Parental gene expression (RPM)
SRP017611_liver 8 .88 RPM
SRP017611_kidney 20 .52 RPM
SRP017611_brain 24 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006624 ortholog_one2one 1 retrogene
retro_amel_875,
Bos taurus ENSBTAG00000016709 ortholog_one2one 1 retrogene
retro_btau_1465,
Canis familiaris ENSCAFG00000003154 ortholog_one2one 1 retrogene
retro_cfam_1295,
Equus caballus ENSECAG00000011777 ortholog_one2one 1 retrogene
retro_ecab_1118,
Homo sapiens ENSG00000122643 ortholog_one2one 1 retrogene
retro_hsap_3084,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_632 63.59 69.02
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Download FASTA sequences of all ENSRNOG00000005981 retrocopies