Parental gene:

NT5C3A, ENSECAG00000011777

Aliases:NT5C3A, NT5C3
Description:5'-nucleotidase, cytosolic IIIA [Source:HGNC Symbol;Acc:17820]
Organism:Horse (Equus caballus)
Coordinates:4:62993161..63044221(-)


>ENSECAG00000011777
CTGGAGGCCCTGTCCATGGACCGGGCGGCGGTGGCGAGGGTGGGCGCGGTAGCGAGCGCCAGTGTGTGCGCCCTGGTGGC
GGGGGTGGTGCTGGCCCAGTACATATTCACCTTGAAGAGGAAGACGGGGCGGAAGACCAAGATCATCGAGATGATGCCAG
AATTCCAGAAAAGTTCAGTTCGCATCAAGAACCCTACAAGAGTAGAAGAAATTATCTGTGGTCTTATCAAAGGAGGAGCT
GCCAAGCTTCAGATAATAACAGACTTTGATATGACACTGAGTAGATTTTCCTATGAAGGGAAAAGATGCCCAACGTGTCA
TAATATCATTGACAACTGTAAGCTGGTTACTGATGAATGTCGAAAAAAGTTACTGCAACTAAAGGAAAAATATTATGCTA
TTGAAGTTGATCCTGTGCTTACAGTAGAAGAGAAGTACCCTTATATGGTAGAATGGTATACTAAATCACATGGTTTGCTT
GTTGAACAAGCTTTACCGAAAGCTAAGCTTAAAGAAATTGTGGCCGAATCTGATGTTATGCTCAAGGAAGGATATGAGAA
TTTCTTTGATAAGCTCCAACAGCACAGCATCCCTGTGTTCATATTTTCGGCTGGTATCGGTGATGTTCTAGAGGAGGTTA
TCCGTCAAGCTGGTGTTTATCATCCGAATGTCAAAGTAGTGTCCAACTTCATGGATTTTGATGATAAAGGGTTGCTCAAA
GGATTTAAAGGAGAACTAATTCATGTATTTAACAAACATGATGGTGCCTTGAAGAATACAGAATATTTCAATCAACTAAA
AGACAATAGCAACATAATTCTGCTGGGAGACTCACAAGGAGACTTAAGAATGGCAGATGGCGTAGCCAACGTTGAACACA
TTCTGAAAATCGGATATCTAAATGATAGAGTGGATGAACTTTTAGAAAAGTATATGGACTCTTACGATATTGTTCTAGTA
AAAGACGAATCATTGGAGGTGGCCAACTCTATCTTACAGAAGATTCTGTAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 3 .40 RPM
SRP021940_embryo 5 .27 RPM
SRP021940_cerebellum 7 .37 RPM
SRP021940_testis 3 .96 RPM
SRP021940_placental_villous 8 .13 RPM
SRP021940_articular_cartilage 3 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006624 ortholog_one2one 1 retrogene
retro_amel_875,
Bos taurus ENSBTAG00000016709 ortholog_one2one 1 retrogene
retro_btau_1465,
Canis familiaris ENSCAFG00000003154 ortholog_one2one 1 retrogene
retro_cfam_1295,
Homo sapiens ENSG00000122643 ortholog_one2one 1 retrogene
retro_hsap_3084,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Rattus norvegicus ENSRNOG00000005981 ortholog_one2one 1 retrogene
retro_rnor_632,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_1118 65.83 58.33
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Download FASTA sequences of all ENSECAG00000011777 retrocopies