Parental gene: | RGD1562502, ENSRNOG00000002662 |
| Aliases: | Pbdc1, RGD1562502 |
| Description: | None |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | X:76840413..76845113(+) |
>ENSRNOG00000002662
ATGGATGCTGCCAGCGAAAGCGAAGAGCCGGTTTCTGGGGAAGCGTTGTCCATCGCCCATGCTCTTTCTTACCCTCCCGA
GTCATATGGCAACGACCCTGATATTGAAATGGCTTGGGCCATTCGAGCAATGCAGCATGCTGAAGTCTATTATAAACTGA
TTTCATCAGTTGACCCACAGTTTCTGAAACTCACCAAGGTGGATGACCAAATCTACTCTGAGTTCCGGGAAAATTTTGAG
ACACTCAGGATAGATGTATTGGACCCAGAAGAACTCAAATCAGAATCAGCTAAAGAGAAGTGGAGACCATTCTGTTTAAA
ATTCGAAGGGATCGTAGAAGATTACAACTATGGTACTTTGCTGCGACTGGATTGTTCTCAGGGCTACACTGAAGAGAACA
CTATCTTTGCACCCAGGATTCAATTTTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAACAAAGCAGTTTCCGTC
AGTGTTCAGGACAAAGAAGGAAAGGAAGGAGCTGACAATAAAGAAGAGGAAGCTGAGAAAGGAGCTGATAGTGGAGGAGA
AAAAGAGGAAGGAGTCAACAGAGAAGGAGAAAAGTAA
ATGGATGCTGCCAGCGAAAGCGAAGAGCCGGTTTCTGGGGAAGCGTTGTCCATCGCCCATGCTCTTTCTTACCCTCCCGA
GTCATATGGCAACGACCCTGATATTGAAATGGCTTGGGCCATTCGAGCAATGCAGCATGCTGAAGTCTATTATAAACTGA
TTTCATCAGTTGACCCACAGTTTCTGAAACTCACCAAGGTGGATGACCAAATCTACTCTGAGTTCCGGGAAAATTTTGAG
ACACTCAGGATAGATGTATTGGACCCAGAAGAACTCAAATCAGAATCAGCTAAAGAGAAGTGGAGACCATTCTGTTTAAA
ATTCGAAGGGATCGTAGAAGATTACAACTATGGTACTTTGCTGCGACTGGATTGTTCTCAGGGCTACACTGAAGAGAACA
CTATCTTTGCACCCAGGATTCAATTTTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAACAAAGCAGTTTCCGTC
AGTGTTCAGGACAAAGAAGGAAAGGAAGGAGCTGACAATAAAGAAGAGGAAGCTGAGAAAGGAGCTGATAGTGGAGGAGA
AAAAGAGGAAGGAGTCAACAGAGAAGGAGAAAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .18 RPM |
| SRP017611_kidney | 10 .12 RPM |
| SRP017611_brain | 12 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017228 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018571 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000009882 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001116 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009685 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031226 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001088 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015205 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000017872 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003411 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_826 | 87.65 | 81.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1703 | 80.74 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_1705 | 77.94 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000002662 retrocopies