Parental gene:

ENSPTRG00000033858

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:2A:37730011..37733863(+)


>ENSPTRG00000033858
ATGGCCCGTACTTTGGAACCACTAGCAAAGAAGATCTTTAAAGGAGTTTTGGTAGCCGAACTTGTAGGCGTTTTTGGAGC
ATATTTTTTGTTTAGCAAGATGCACACAAGCCAAGATTTCAGGCAAACAATGAGCAAGAAATATCCCTTCATCTTGGAAG
TTTATTACAAATCCACTGAGAAGTCTGGAATGTATGGAATCAGAGAGCTAGATCAAAAAACATGGTTGAATAGCAAAAAT
TAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 9 .74 RPM
SRP007412_cerebellum 5 .74 RPM
SRP007412_heart 12 .91 RPM
SRP007412_kidney 7 .11 RPM
SRP007412_liver 2 .13 RPM
SRP007412_testis 10 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017579 ortholog_one2one 1 retrogene
retro_amel_629,
Choloepus hoffmanni ENSCHOG00000013008 ortholog_one2many 2 retrogenes
retro_chof_328, retro_chof_49,
Felis catus ENSFCAG00000023228 ortholog_one2one 2 retrogenes
retro_fcat_1289, retro_fcat_1750,
Homo sapiens ENSG00000218739 ortholog_one2one 2 retrogenes
retro_hsap_2312, retro_hsap_4294,
Gorilla gorilla ENSGGOG00000025368 ortholog_one2one 2 retrogenes
retro_ggor_1755, retro_ggor_2869,
Mus musculus ENSMUSG00000062691 ortholog_one2one 2 retrogenes
retro_mmus_426, retro_mmus_509,
Pongo abelii ENSPPYG00000029876 ortholog_one2one 2 retrogenes
retro_pabe_2045, retro_pabe_3499,
Rattus norvegicus ENSRNOG00000040303 ortholog_one2one 2 retrogenes
retro_rnor_1144, retro_rnor_973,
Sus scrofa ENSSSCG00000020689 ortholog_one2one 2 retrogenes
retro_sscr_328, retro_sscr_434,
Tursiops truncatus ENSTTRG00000006884 ortholog_one2one 7 retrogenes
retro_ttru_1069, retro_ttru_1866, retro_ttru_1946, retro_ttru_274, retro_ttru_526, retro_ttru_57, retro_ttru_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_1687 68.18 82.50
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2. retro_ptro_2911 65.00 98.75
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Download FASTA sequences of all ENSPTRG00000033858 retrocopies