Parental gene:

ENSFCAG00000023228

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:A3:112336324..112342843(-)


>ENSFCAG00000023228
ATGGCCCGCACTATGGAACCACTGGCAAAGAAGATCTTTAAAGGAGTTTTAGTAGTTGAACTTGTGGGCGTTTTTGGAGC
ATATTTTTTGTTTAACAAGATGAACACAAGTCAAGATTTCAGGCAAACAATGAGCAAAAAATTCCCCTTCATCTTGGAAG
TTTATTACAAATCCATTGAACAGTCTGGAATGTATGGAGTCAGAGAGCAAGATCAAGAAAAATGGCTGAATAGCAAAAAT
TAA

Library Parental gene expression (RPM)
SRP017611_liver 15 .16 RPM
SRP017611_kidney 16 .49 RPM
SRP017611_brain 17 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017579 ortholog_one2one 1 retrogene
retro_amel_629,
Choloepus hoffmanni ENSCHOG00000013008 ortholog_one2many 2 retrogenes
retro_chof_328, retro_chof_49,
Homo sapiens ENSG00000218739 ortholog_one2one 2 retrogenes
retro_hsap_2312, retro_hsap_4294,
Gorilla gorilla ENSGGOG00000025368 ortholog_one2one 2 retrogenes
retro_ggor_1755, retro_ggor_2869,
Mus musculus ENSMUSG00000062691 ortholog_one2one 2 retrogenes
retro_mmus_426, retro_mmus_509,
Pongo abelii ENSPPYG00000029876 ortholog_one2one 2 retrogenes
retro_pabe_2045, retro_pabe_3499,
Pan troglodytes ENSPTRG00000033858 ortholog_one2one 2 retrogenes
retro_ptro_1687, retro_ptro_2911,
Rattus norvegicus ENSRNOG00000040303 ortholog_one2one 2 retrogenes
retro_rnor_1144, retro_rnor_973,
Sus scrofa ENSSSCG00000020689 ortholog_one2one 2 retrogenes
retro_sscr_328, retro_sscr_434,
Tursiops truncatus ENSTTRG00000006884 ortholog_one2one 7 retrogenes
retro_ttru_1069, retro_ttru_1866, retro_ttru_1946, retro_ttru_274, retro_ttru_526, retro_ttru_57, retro_ttru_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1289 85.19 100.00
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2. retro_fcat_1750 54.55 68.75
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Download FASTA sequences of all ENSFCAG00000023228 retrocopies