Parental gene: | NDUFA3, ENSPTRG00000028890 |
| Aliases: | NDUFA3, CI-B9 |
| Description: | Pan troglodytes NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa (NDUFA3), mRNA. [Source:RefSeq mRNA;Acc:NM_001251975] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:59010723..59014842(+) |
>ENSPTRG00000028890
ATGGCTGCGAGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGG
CCTCGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACC
CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGCCTGGAGTGG
CTGAAGAAACTGTGA
ATGGCTGCGAGAGTCGGCGCCTTCCTCAAGAATGCCTGGGACAAGGAGCCAGTGCTGGTCGTGTCCTTCGTCGTCGGGGG
CCTCGCTGTAATTCTGCCCCCATTGAGCCCCTACTTCAAGTACTCCGTCATGATCAACAAGGCCACGCCCTACAACTACC
CAGTGCCCGTCCGTGATGATGGGAACATGCCCGACGTGCCCAGCCACCCCCAGGACCCCCAGGGCCCCAGCCTGGAGTGG
CTGAAGAAACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 64 .38 RPM |
| SRP007412_cerebellum | 15 .16 RPM |
| SRP007412_heart | 20 .64 RPM |
| SRP007412_kidney | 44 .88 RPM |
| SRP007412_liver | 21 .67 RPM |
| SRP007412_testis | 7 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007754 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000002703 | ortholog_one2many | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018518 | ortholog_one2many | 5 retrogenes | |
| Cavia porcellus | ENSCPOG00000021937 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015897 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000003611 | ortholog_one2many | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023650 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018014 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000002939 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000004118 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010317 | ortholog_one2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000035674 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006931 | ortholog_one2one | 10 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015560 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014224 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009016 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000003261 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000025377 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_255 | 77.65 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_842 | 76.19 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1032 | 63.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ptro_1093 | 77.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ptro_1336 | 72.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000028890 retrocopies