Parental gene: | ENSCJAG00000018518 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:45346930..45351501(+) |
>ENSCJAG00000018518
ATGGCCGCAAGACTCGGCGCCTTCCTCAAGAATGCTTGGGCCAAGGAGCCAGTACTGGTCGTGTCCTTCTTCATCGGGAC
CCTCGCTGTAATTCTGCCCCCAATCAGCCCCTACTTCAAGTACTCTGTCATGATCAACAAGGCCACGCCCTACAACTACC
CAGTGCCTGTCCGCGATGATGGGAACATGCCCGACATACCCAGCCACCCCCAGGACCCCCAGGGACCCAGCCTGGAGTGG
CTGAAGAACCTGTGA
ATGGCCGCAAGACTCGGCGCCTTCCTCAAGAATGCTTGGGCCAAGGAGCCAGTACTGGTCGTGTCCTTCTTCATCGGGAC
CCTCGCTGTAATTCTGCCCCCAATCAGCCCCTACTTCAAGTACTCTGTCATGATCAACAAGGCCACGCCCTACAACTACC
CAGTGCCTGTCCGCGATGATGGGAACATGCCCGACATACCCAGCCACCCCCAGGACCCCCAGGGACCCAGCCTGGAGTGG
CTGAAGAACCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .03 RPM |
| SRP051959_skeletal_muscle | 18 .10 RPM |
| SRP051959_lymph_node | 5 .27 RPM |
| SRP051959_lung | 7 .04 RPM |
| SRP051959_liver | 17 .33 RPM |
| SRP051959_kidney | 18 .04 RPM |
| SRP051959_heart | 19 .54 RPM |
| SRP051959_colon | 5 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007754 | ortholog_many2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000002703 | ortholog_many2many | 4 retrogenes | |
| Cavia porcellus | ENSCPOG00000021937 | ortholog_one2many | 1 retrogene | |
| Equus caballus | ENSECAG00000015897 | ortholog_one2many | 3 retrogenes | |
| Felis catus | ENSFCAG00000003611 | ortholog_many2many | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023650 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000018014 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000002939 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000004118 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010317 | ortholog_many2many | 3 retrogenes | |
| Mus musculus | ENSMUSG00000035674 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000006931 | ortholog_one2many | 10 retrogenes | |
| Pan troglodytes | ENSPTRG00000028890 | ortholog_one2many | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015560 | ortholog_one2many | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000014224 | ortholog_many2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009016 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000003261 | ortholog_many2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000025377 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_92 | 96.43 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_188 | 83.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_382 | 72.15 | 92.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2215 | 78.67 | 87.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2526 | 86.90 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018518 retrocopies