Parental gene:

BECN1, ENSPTRG00000022819

Aliases:BECN1, beclin-1
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:14559353..14573735(+)


>ENSPTRG00000022819
ATGGAAGGGTCTAAGACGTCCAACAACAGCACCATGCAGGTGAGCTTCGTGTGCCAGCGCTGCAGCCAGCCCCTGAAACT
GGACACGAGTTTCAAGATCCTGGACCGTGTCACCATCCAGGAACTCACAGCTCCATTACTTACCACAGCCCAGGCGAAAC
CAGGAGAGACCCAGGAGGAAGAGACTAACTCAGGAGAGGAGCCATTTATTGAAACTCCTCGCCAGGATGGTGTCTCTCGC
AGATTCATCCCCCCAGCCAGGATGATGTCCACAGAAAGTGCCAACAGCTTCACTCTGATTGGGGAGGCATCTGATGGCGG
CACCATGGAGAACCTCAGCCGAAGACTGAAGGTCACTGGGGACCTTTTTGACATCATGTCGGGCCAGACAGATGTGGATC
ACCCACTCTGTGAGGAATGCACAGATACTCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAGTGTCAG
AACTACAAACGCTGTTTGGAGATCTTAGAGCAAATGAATGAGGATGACAGTGAACAGTTACAGATGGAGCTTAAGGAGCT
GGCACTAGAGGAGGAGAGGCTGATCCAGGAGCTGGAAGACGTGGAAAAGAACCGCAAGACAGTGGCAGAAAATCTCGAGA
AGGTCCAGGCTGAGGCTGAGAGACTGGATCAGGAGGAAGCTCAGTATCAGAGAGAATACAGTGAATTTAAACGACAGCAG
CTGGAGCTGGATGATGAGCTGAAGAGTGTTGAAAACCAGATGCGTTATGCCCAGACGCAGCTGGATAAGCTGAAGAAAAC
CAACGTCTTTAATGCAACCTTCCACATCTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCAGGCTGGGTCGCCTGC
CCAGTGTTCCCGTGGAATGGAATGAGATTAATGCTGCTTGGGGCCAGACTGTGTTGCTGCTCCATGCTCTGGCCAATAAG
ATGGGTCTGAAATTTCAGAGATACCGACTTGTTCCTTACGGAAACCATTCATATCTGGAGTCTCTGACAGACAAATCTAA
GGAGCTGCCGTTATACTGTTCTGGGGGGTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTGGCTTTCCTGG
ACTGTGTGCAGCAGTTCAAAGAAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCCTACAGGATGGATGTGGAGAAA
GGCAAGATTGAAGACACAGGAGGCAGCGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCTGAGGAGCAGTGGACAAA
AGCTCTCAAGTTCATGCTGACGAATCTTAAGTGGGGTCTTGCTTGGGTGTCCTCACAATTTTATAACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 31 .33 RPM
SRP007412_cerebellum 59 .33 RPM
SRP007412_heart 43 .69 RPM
SRP007412_kidney 47 .07 RPM
SRP007412_liver 32 .41 RPM
SRP007412_testis 29 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006867 ortholog_one2one 1 retrogene
retro_amel_16,
Bos taurus ENSBTAG00000019914 ortholog_one2one 1 retrogene
retro_btau_226,
Dipodomys ordii ENSDORG00000000956 ortholog_one2one 1 retrogene
retro_dord_675,
Felis catus ENSFCAG00000013136 ortholog_one2one 1 retrogene
retro_fcat_62,
Homo sapiens ENSG00000126581 ortholog_one2one 1 retrogene
retro_hsap_335,
Macropus eugenii ENSMEUG00000011700 ortholog_one2one 1 retrogene
retro_meug_600,
Macaca mulatta ENSMMUG00000029971 ortholog_one2one 1 retrogene
retro_mmul_81,
Monodelphis domestica ENSMODG00000015064 ortholog_one2one 1 retrogene
retro_mdom_1778,
Mus musculus ENSMUSG00000035086 ortholog_one2one 1 retrogene
retro_mmus_390,
Nomascus leucogenys ENSNLEG00000011840 ortholog_one2one 1 retrogene
retro_nleu_1776,
Oryctolagus cuniculus ENSOCUG00000015964 ortholog_one2one 3 retrogenes
retro_ocun_1021, retro_ocun_1732, retro_ocun_218,
Procavia capensis ENSPCAG00000014049 ortholog_one2one 1 retrogene
retro_pcap_345,
Sorex araneus ENSSARG00000000367 ortholog_one2one 1 retrogene
retro_sara_136,
Sus scrofa ENSSSCG00000017386 ortholog_one2one 1 retrogene
retro_sscr_75,
Ictidomys tridecemlineatus ENSSTOG00000012612 ortholog_one2one 1 retrogene
retro_itri_25,
Tursiops truncatus ENSTTRG00000011716 ortholog_one2one 1 retrogene
retro_ttru_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_268 57.92 89.56
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Download FASTA sequences of all ENSPTRG00000022819 retrocopies