Parental gene:

Becn1, ENSMUSG00000035086

Aliases:None
Description:beclin 1, autophagy related [Source:MGI Symbol;Acc:MGI:1891828]
Organism:Mouse (Mus musculus)
Coordinates:11:101285951..101302286(-)


>ENSMUSG00000035086
ATGGAGGGGTCTAAGGCGTCCAGCAGCACCATGCAGGTGAGCTTCGTGTGCCAGCGCTGTAGCCAGCCTCTGAAACTGGA
CACGAGCTTCAAGATCCTGGACCGGGTCACCATCCAGGAACTCACAGCTCCATTACTTACCACAGCCCAGGCGAAACCAG
GAGAGACCCAGGAGGAAGAGGCTAACTCAGGAGAGGAGCCATTTATTGAAACTCGCCAGGATGGTGTCTCTCGAAGATTC
ATCCCCCCAGCCAGGATGATGTCTACAGAAAGTGCTAATAGCTTCACTCTGATCGGGGAGGCATCTGATGGTGGCACCAT
GGAGAACCTCAGCCGGAGACTCAAGGTCACTGGAGACCTGTTTGACATCATGTCGGGCCAGACCGATGTGGATCACCCGC
TGTGTGAGGAATGCACAGACACTCTTTTAGACCAGCTGGACACTCAGCTCAATGTCACTGAGAATGAATGTCAGAACTAC
AAACGCTGTTTGGAGATCCTAGAGCAGATGAATGAGGATGACAGTGAGCAGCTGCAGAGGGAGCTGAAGGAGCTGGCCTT
GGAGGAGGAGAGGCTGATCCAGGAGCTGGAAGATGTGGAAAAGAACCGCAAGGTGGTGGCAGAGAACCTGGAGAAGGTCC
AGGCTGAGGCGGAGAGATTGGACCAGGAGGAAGCTCAGTACCAGCGGGAGTATAGTGAGTTTAAAAGGCAGCAGCTGGAG
TTGGATGACGAACTCAAGAGTGTGGAGAACCAGGTGCGCTACGCCCAGATCCAGCTGGACAAGCTCAAGAAAACCAATGT
CTTCAATGCCACCTTCCACATCTGGCACAGCGGACAGTTTGGCACAATCAATAATTTCAGACTGGGTCGCTTGCCCAGTG
TTCCTGTGGAGTGGAATGAAATCAATGCTGCCTGGGGCCAGACAGTGCTGCTGCTCCATGCTTTGGCCAATAAGATGGGT
CTGAAGTTTCAGAGGTACCGACTTGTTCCCTATGGAAATCATTCCTATCTGGAGTCTCTGACAGACAAATCTAAGGAGTT
GCCGTTATACTGTTCTGGGGGTTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTAGCTTTTCTGGACTGTG
TGCAGCAGTTCAAAGAAGAGGTGGAAAAAGGAGAGACTCGATTTTGTCTTCCGTACAGGATGGACGTGGAGAAAGGCAAG
ATTGAAGACACTGGAGGCAGTGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCGGAGGAGCAGTGGACAAAAGCGCT
CAAGTTCATGCTGACCAATCTCAAGTGGGGTCTTGCCTGGGTGTCCTCACAGTTCTATAACAAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 62 .94 RPM
SRP007412_cerebellum 61 .01 RPM
SRP007412_heart 40 .91 RPM
SRP007412_kidney 81 .70 RPM
SRP007412_liver 45 .47 RPM
SRP007412_testis 86 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006867 ortholog_one2one 1 retrogene
retro_amel_16,
Bos taurus ENSBTAG00000019914 ortholog_one2one 1 retrogene
retro_btau_226,
Dipodomys ordii ENSDORG00000000956 ortholog_one2one 1 retrogene
retro_dord_675,
Felis catus ENSFCAG00000013136 ortholog_one2one 1 retrogene
retro_fcat_62,
Homo sapiens ENSG00000126581 ortholog_one2one 1 retrogene
retro_hsap_335,
Macropus eugenii ENSMEUG00000011700 ortholog_one2one 1 retrogene
retro_meug_600,
Macaca mulatta ENSMMUG00000029971 ortholog_one2one 1 retrogene
retro_mmul_81,
Monodelphis domestica ENSMODG00000015064 ortholog_one2one 1 retrogene
retro_mdom_1778,
Nomascus leucogenys ENSNLEG00000011840 ortholog_one2one 1 retrogene
retro_nleu_1776,
Oryctolagus cuniculus ENSOCUG00000015964 ortholog_one2one 3 retrogenes
retro_ocun_1021, retro_ocun_1732, retro_ocun_218,
Procavia capensis ENSPCAG00000014049 ortholog_one2one 1 retrogene
retro_pcap_345,
Pan troglodytes ENSPTRG00000022819 ortholog_one2one 1 retrogene
retro_ptro_268,
Sorex araneus ENSSARG00000000367 ortholog_one2one 1 retrogene
retro_sara_136,
Sus scrofa ENSSSCG00000017386 ortholog_one2one 1 retrogene
retro_sscr_75,
Ictidomys tridecemlineatus ENSSTOG00000012612 ortholog_one2one 1 retrogene
retro_itri_25,
Tursiops truncatus ENSTTRG00000011716 ortholog_one2one 1 retrogene
retro_ttru_595,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_390 50.14 77.46
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Download FASTA sequences of all ENSMUSG00000035086 retrocopies