Parental gene: | ANP32B, ENSPTRG00000021172 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 9:96772984..96805571(+) |
>ENSPTRG00000021172
ATGGACATGAAGAGGAGGATCCACCTGGAGCTGAGGAACCGGACCCCGGCAGCTGTTCGAGAACTTGTCTTGGACAATTG
CAAATCAAATGATGGAAAAATTGAGGGCTTAACAGCTGAATTTGTGAACTTAGAGTTCCTCAGTTTAATAAATGTAGGCT
TGATCTCAGTTTCAAATCTCCCCAAGCTGCCTAAATTGAAAAAGCTTGAACTCAGTGAAAATAGAATCTTTGGAGGTCTG
GACATGTTAGCTGAAAAACTTCCAAATCTCACACATCTAAACTTAAGTGGAAATAAACTGAAAGATATCAGCACCTTGGA
ACCTTTGAAAAAGTTAGAATGTCTGAAAAGCCTGGACCTCTTTAACTGTGAGGTTACCAACCTGAATGACTACCGAGAGA
GTGTCTTCAAGCTCCTGCCCCAGCTTACCTACTTGGATGGCTATGACCGAGAGGACCAGGAAGCACCTGACTCAGATGCC
GAGGTGGATGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGAGGAGGATGAGGATGGTGAAGA
AGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGAAG
AAGAATTTGGACTTGATGAAGAAGATGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGGGAAAGGTGAAAAGAGG
AAGAGAGAAACAGATGATGAAGGAGAAGATGATTAA
ATGGACATGAAGAGGAGGATCCACCTGGAGCTGAGGAACCGGACCCCGGCAGCTGTTCGAGAACTTGTCTTGGACAATTG
CAAATCAAATGATGGAAAAATTGAGGGCTTAACAGCTGAATTTGTGAACTTAGAGTTCCTCAGTTTAATAAATGTAGGCT
TGATCTCAGTTTCAAATCTCCCCAAGCTGCCTAAATTGAAAAAGCTTGAACTCAGTGAAAATAGAATCTTTGGAGGTCTG
GACATGTTAGCTGAAAAACTTCCAAATCTCACACATCTAAACTTAAGTGGAAATAAACTGAAAGATATCAGCACCTTGGA
ACCTTTGAAAAAGTTAGAATGTCTGAAAAGCCTGGACCTCTTTAACTGTGAGGTTACCAACCTGAATGACTACCGAGAGA
GTGTCTTCAAGCTCCTGCCCCAGCTTACCTACTTGGATGGCTATGACCGAGAGGACCAGGAAGCACCTGACTCAGATGCC
GAGGTGGATGGTGTGGATGAAGAGGAGGAGGACGAAGAAGGAGAAGATGAGGAAGACGAGGAGGATGAGGATGGTGAAGA
AGAGGAGTTTGATGAAGAAGATGATGAAGATGAAGATGTAGAAGGGGATGAGGACGACGATGAAGTCAGTGAGGAGGAAG
AAGAATTTGGACTTGATGAAGAAGATGAAGATGAGGATGAGGATGAAGAGGAGGAAGAAGGTGGGAAAGGTGAAAAGAGG
AAGAGAGAAACAGATGATGAAGGAGAAGATGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 36 .00 RPM |
| SRP007412_cerebellum | 40 .58 RPM |
| SRP007412_heart | 54 .12 RPM |
| SRP007412_kidney | 55 .89 RPM |
| SRP007412_liver | 94 .86 RPM |
| SRP007412_testis | 78 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000005149 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000020118 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000012310 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015514 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000136938 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000004844 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000012242 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000003261 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000006433 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028333 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016941 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006091 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007219 | within_species_paralog | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006569 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000000804 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002189 | ortholog_one2one | 8 retrogenes | |
| Tursiops truncatus | ENSTTRG00000010825 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_40 | 56.85 | 98.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1073 | 95.56 | 53.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ptro_1075 | 88.51 | 58.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000021172 retrocopies