Parental gene:

ANP32B, ENSCPOG00000020118

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_27:19510871..19522147(+)


>ENSCPOG00000020118
CTGCCTTGTGACGAAAGGCTGCTTTCTGAATATTTACTAAGGGCCAGGCGTTATCCTCAGGTTCGAGAACTTGTCTTGGA
CAATTGCAAATCAAATGATGGAAAAATTGAAGGCTTAACAGCTGAATTTGTGAACTTAGAGTTCCTCAGTTTAATAAATG
TATGCTTGCTTTCAGTTTCAAATCTCCCCAAGCTACCTAAATTGAAAAAGCTTGAGCTCAGTGACAATAGAATCTTCGGG
GGTCTGGACATGTTAGCAGAAAAACTTCCAAATCTCACACATCTAAATTTAAGTGGAAATAAACTGAAAGACATCAGCAC
CTTGGAACCTTTGAAAAAATTGGATTGTCTGAAAAGCCTGGATTTGTTTAATTGTGAAGTCACCAACCTGAATGACTACC
GAGAGAGTGTCTTCAAGCTCTTGCCCCAACTAAGCTACCTGGATGGCTATGACAGAGAGGACCGGGAAGCCCCAGATTCA
GATGCAGAGGTAGATGGCGTAGATGAAGAGGAGGAGGATGAAGGTGAG

Library Parental gene expression (RPM)
SRP017611_liver 22 .81 RPM
SRP017611_kidney 40 .51 RPM
SRP017611_brain 18 .52 RPM
SRP040447_lung 37 .48 RPM
SRP040447_skeletal_muscle 20 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005149 ortholog_one2one 6 retrogenes
retro_chof_1293, retro_chof_1456, retro_chof_19, retro_chof_2244, retro_chof_588, retro_chof_681,
Equus caballus ENSECAG00000012310 ortholog_one2one 2 retrogenes
retro_ecab_246, retro_ecab_826,
Echinops telfairi ENSETEG00000015514 ortholog_one2one 4 retrogenes
retro_etel_2053, retro_etel_2167, retro_etel_510, retro_etel_677,
Homo sapiens ENSG00000136938 ortholog_one2one 2 retrogenes
retro_hsap_1597, retro_hsap_1603,
Myotis lucifugus ENSMLUG00000004844 ortholog_one2one 2 retrogenes
retro_mluc_1787, retro_mluc_1788,
Macaca mulatta ENSMMUG00000012242 ortholog_one2one 1 retrogene
retro_mmul_2600,
Monodelphis domestica ENSMODG00000003261 ortholog_one2one 1 retrogene
retro_mdom_763,
Mustela putorius furo ENSMPUG00000006433 ortholog_one2one 1 retrogene
retro_mputfur_1392,
Mus musculus ENSMUSG00000028333 ortholog_one2many 1 retrogene
retro_mmus_2399,
Nomascus leucogenys ENSNLEG00000016941 ortholog_one2many 1 retrogene
retro_nleu_3009,
Otolemur garnettii ENSOGAG00000006091 ortholog_one2one 2 retrogenes
retro_ogar_1915, retro_ogar_3282,
Pongo abelii ENSPPYG00000019430 ortholog_one2many 2 retrogenes
retro_pabe_1312, retro_pabe_1316,
Pan troglodytes ENSPTRG00000021172 ortholog_one2one 3 retrogenes
retro_ptro_1073, retro_ptro_1075, retro_ptro_40,
Pteropus vampyrus ENSPVAG00000006569 ortholog_one2one 1 retrogene
retro_pvam_699,
Sorex araneus ENSSARG00000000804 ortholog_one2one 1 retrogene
retro_sara_549,
Tupaia belangeri ENSTBEG00000002189 ortholog_one2one 8 retrogenes
retro_tbel_1659, retro_tbel_2710, retro_tbel_2772, retro_tbel_3770, retro_tbel_3863, retro_tbel_4351, retro_tbel_4361, retro_tbel_491,
Tursiops truncatus ENSTTRG00000010825 ortholog_one2one 2 retrogenes
retro_ttru_1899, retro_ttru_341,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_493 55.46 69.23
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2. retro_cpor_509 63.64 57.40
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3. retro_cpor_1336 57.45 81.66
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Download FASTA sequences of all ENSCPOG00000020118 retrocopies