Parental gene: | PAICS, ENSPTRG00000016081 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 4:73525733..73550966(-) |
>ENSPTRG00000016081
ATGGCGACAGCTGAGGTACTGAACATTGGTAAAAAATTGTATGAGGGTAAAACAAAAGAAGTCTACGAATTGTTAGATAG
TCCAGGAAAAGTCCTCCTGCAGTCCAAGGACCAGATTACAGCAGGAAATGCAGCTAGAAAAAACCACCTGGAAGGAAAAG
CTGCAATCTCAAATAAAATCACCAGTTGTATTTTTCGGTTATTACAGGAAGCAGGTATTAAAACTGCCTTCACCAGAAAA
TGTGGGGAGACAGCTTTCATTGCACCCCAGTGTGAAATGATTCCAATTGAATGGGTTTGCAGAAGAATAGCAACTGGTTC
TTTTCTCAAAAGAAATCCTGGTGTCAAGGAAGGATATAAGTTTTACCCACCTAAAGTGGAGTTGTTTTTCAAGGATGATG
CCAATAATGACCCACAGTGGTCTGAGGAACAGCTGATTGCTGCAAAATTTTGCTTTGCTGGACTTGTTATAGGCCAGACT
GAAGTGGATATCATGAGTCATGCTACACAGGCTATATTTGAAATACTGGAGAAATCCTGGTTGCCCCAGAATTGTACACT
GGTTGATATGAAGATTGAATTTGGTGTTGATGTAACCACCAAAGAAATTGTTCTTGCTGATGTTATTGACAATGATTCCT
GGAGACTCTGGCCATCAGGAGATCGAAGCCAACAGAAAGACAAACAGTCTTATCGGGACCTCAAAGAAGTAACTCCTGAA
GGGCTCCAAATGGTAAAGAAAAACTTTGAGTGGGTTGCAGAGAGAGTAGAGTTGCTTTTGAAATCAGAAAGTCAGTGCAG
GGTTGTAGTGTTGATGGGCTCTACTTCTGATCTTGGTCACTGTGAAAAAATCAAGAAGGCCTGTGGAAGTTTTGGCATTC
CATGTGAACTTCGAGTAACATCTGCACATAAAGGACCAGATGAAACTCTGAGGATTAAAGCTGAGTATGAAGGGGATGGC
ATTCCTACTGTATTTGTGGCAGTGGCAGGCAGAAGTAATGGTTTGGGACCAGTGATGTCTGGGAACACTGCATATCCAGT
TATCAGCTGTCCTCCCCTCACACCAGACTGGGGAGCTCAGGATGTGTGGTCTTCTCTTCGACTACCCAGTGGTCTTGGCT
GTTCAACCATACTTTCTCCAGAAGGATCAGCTCAATTTGCTGCTCAGATATTTGGGTTAAGCAACCATTTGGTATGGAGC
AAACTGCGAGCAAGCATTTTGAACACATGGATTTCCTTGAAGCAGGCTGACAAGAAAATCAGAGAATGTAATTTATAA
ATGGCGACAGCTGAGGTACTGAACATTGGTAAAAAATTGTATGAGGGTAAAACAAAAGAAGTCTACGAATTGTTAGATAG
TCCAGGAAAAGTCCTCCTGCAGTCCAAGGACCAGATTACAGCAGGAAATGCAGCTAGAAAAAACCACCTGGAAGGAAAAG
CTGCAATCTCAAATAAAATCACCAGTTGTATTTTTCGGTTATTACAGGAAGCAGGTATTAAAACTGCCTTCACCAGAAAA
TGTGGGGAGACAGCTTTCATTGCACCCCAGTGTGAAATGATTCCAATTGAATGGGTTTGCAGAAGAATAGCAACTGGTTC
TTTTCTCAAAAGAAATCCTGGTGTCAAGGAAGGATATAAGTTTTACCCACCTAAAGTGGAGTTGTTTTTCAAGGATGATG
CCAATAATGACCCACAGTGGTCTGAGGAACAGCTGATTGCTGCAAAATTTTGCTTTGCTGGACTTGTTATAGGCCAGACT
GAAGTGGATATCATGAGTCATGCTACACAGGCTATATTTGAAATACTGGAGAAATCCTGGTTGCCCCAGAATTGTACACT
GGTTGATATGAAGATTGAATTTGGTGTTGATGTAACCACCAAAGAAATTGTTCTTGCTGATGTTATTGACAATGATTCCT
GGAGACTCTGGCCATCAGGAGATCGAAGCCAACAGAAAGACAAACAGTCTTATCGGGACCTCAAAGAAGTAACTCCTGAA
GGGCTCCAAATGGTAAAGAAAAACTTTGAGTGGGTTGCAGAGAGAGTAGAGTTGCTTTTGAAATCAGAAAGTCAGTGCAG
GGTTGTAGTGTTGATGGGCTCTACTTCTGATCTTGGTCACTGTGAAAAAATCAAGAAGGCCTGTGGAAGTTTTGGCATTC
CATGTGAACTTCGAGTAACATCTGCACATAAAGGACCAGATGAAACTCTGAGGATTAAAGCTGAGTATGAAGGGGATGGC
ATTCCTACTGTATTTGTGGCAGTGGCAGGCAGAAGTAATGGTTTGGGACCAGTGATGTCTGGGAACACTGCATATCCAGT
TATCAGCTGTCCTCCCCTCACACCAGACTGGGGAGCTCAGGATGTGTGGTCTTCTCTTCGACTACCCAGTGGTCTTGGCT
GTTCAACCATACTTTCTCCAGAAGGATCAGCTCAATTTGCTGCTCAGATATTTGGGTTAAGCAACCATTTGGTATGGAGC
AAACTGCGAGCAAGCATTTTGAACACATGGATTTCCTTGAAGCAGGCTGACAAGAAAATCAGAGAATGTAATTTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 29 .65 RPM |
| SRP007412_cerebellum | 43 .59 RPM |
| SRP007412_heart | 15 .51 RPM |
| SRP007412_kidney | 38 .65 RPM |
| SRP007412_liver | 69 .36 RPM |
| SRP007412_testis | 34 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010577 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010749 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000013413 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015242 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000128050 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024392 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000029247 | ortholog_one2one | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000008786 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003575 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000008531 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002101 | ortholog_one2many | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000006751 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000010497 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0020513 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2662 | 81.03 | 54.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2670 | 93.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000016081 retrocopies