Parental gene:

C1QBP, ENSPTRG00000008631

Aliases:C1QBP, gC1qR
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:5462868..5469295(-)


>ENSPTRG00000008631
ATGCTGCCTCTGCTGCGCTGCGTGCCCCGTGTGCTGGGCTCCTCCGTCGCCGGCCTCCGCGCTGCCGCGCCCGCCTCGCC
TTTCCGGCAGCTCCTGCAGCCGGCACCCCGGCTGTGCACCCGGCCCTTCGGGCTGCTCAGCGTGCGCGCAGGTTCCGAGC
GGCGGCCGGGCCTCCTGCGGCCTCGCGGACCCTGCGCCTGTGGCTGTGGCTGCGGCTCGCTGCACACCGACGGAGACAAA
GCTTTTGTTGATTTCCTGAGTGATGAAATTAAGGAGGAAAGAAAAATTCAGAAGCATAAAAGCCTCCCTAAGATGTCTGG
AGGTTGGGAGCTGGAACTGAATGGGACAGAAGCGAAATTAGTGCGGAAAGTTGCCGGGGAAAAAATCACGGTCACTTTCA
ACATTAACAACAGCATCCCACCAACATTTGATGGTGAGGAGGAACCCTCGCAAGGGCAGAAGGTTGAAGAACAGGAGCCT
GAACTGACATCAACTCCCAATTTCGTGGTTGAAGTTATAAAGAATGATGATGGCAAGAAGGCCCTCGTGTTGGACTGTCA
TTATCCAGAGGATGAGGTTGGACAAGAAGACGAGGCTGAGAGTGACATCTTCTCTATCAGGGAAGTTAGCTTTCAGTCCA
CTGGCGAGTCTGAATGGAAGGATACTAATTATACACTCAACACAGATTCCTTGGACTGGGCCTTATATGACCACCTAATG
GATTTCCTTGCTGACCGAGGGGTGGACAACACTTTTGCAGATGAGTTGGTGGAGCTCAGCACAGCCCTGGAGCACCAGGA
GTACATTACTTTTCTTGAAGACCTCAAGAGTTTTGTCAAGAGCCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .56 RPM
SRP007412_cerebellum 43 .02 RPM
SRP007412_heart 39 .52 RPM
SRP007412_kidney 55 .21 RPM
SRP007412_liver 46 .55 RPM
SRP007412_testis 20 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006043 possible_ortholog 2 retrogenes
retro_amel_1734, retro_amel_356,
Callithrix jacchus ENSCJAG00000011352 ortholog_one2one 6 retrogenes
retro_cjac_2041, retro_cjac_2408, retro_cjac_4033, retro_cjac_604, retro_cjac_680, retro_cjac_946,
Dasypus novemcinctus ENSDNOG00000008887 ortholog_one2one 3 retrogenes
retro_dnov_1151, retro_dnov_1946, retro_dnov_702,
Felis catus ENSFCAG00000026474 possible_ortholog 3 retrogenes
retro_fcat_1135, retro_fcat_1763, retro_fcat_892,
Homo sapiens ENSG00000108561 ortholog_one2one 2 retrogenes
retro_hsap_1475, retro_hsap_2516,
Gorilla gorilla ENSGGOG00000002745 ortholog_one2one 5 retrogenes
retro_ggor_1133, retro_ggor_1569, retro_ggor_3007, retro_ggor_3008, retro_ggor_717,
Macropus eugenii ENSMEUG00000014882 ortholog_one2one 13 retrogenes
retro_meug_1068, retro_meug_1347, retro_meug_1363, retro_meug_1446, retro_meug_1901, retro_meug_1940, retro_meug_1970, retro_meug_2069, retro_meug_2128, retro_meug_434, retro_meug_580, retro_meug_988, retro_meug_989,
Macaca mulatta ENSMMUG00000006592 ortholog_one2one 1 retrogene
retro_mmul_1554,
Nomascus leucogenys ENSNLEG00000009081 ortholog_one2one 2 retrogenes
retro_nleu_2379, retro_nleu_3038,
Otolemur garnettii ENSOGAG00000001610 ortholog_one2one 5 retrogenes
retro_ogar_1376, retro_ogar_2502, retro_ogar_2518, retro_ogar_2879, retro_ogar_768,
Ochotona princeps ENSOPRG00000013150 ortholog_one2one 1 retrogene
retro_opri_408,
Pongo abelii ENSPPYG00000007870 ortholog_one2one 6 retrogenes
retro_pabe_1222, retro_pabe_1385, retro_pabe_1413, retro_pabe_1866, retro_pabe_1868, retro_pabe_670,
Pteropus vampyrus ENSPVAG00000002466 ortholog_one2one 1 retrogene
retro_pvam_384,
Sarcophilus harrisii ENSSHAG00000002441 ortholog_one2one 2 retrogenes
retro_shar_620, retro_shar_813,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_998 59.09 99.29
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2. retro_ptro_1140 82.03 75.89
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3. retro_ptro_1461 71.98 71.99
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Download FASTA sequences of all ENSPTRG00000008631 retrocopies