Parental gene: | C1QBP, ENSPPYG00000007870 |
| Aliases: | None |
| Description: | complement component 1, q subcomponent binding protein [Source:HGNC Symbol;Acc:1243] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 17:5411039..5418000(-) |
>ENSPPYG00000007870
ATGCTTCCTTTGCTGCGCTGTGTGTCCCGTGTGCTGGGCTCCTCCGTCGCCCGCCTCCGCGCTGCCGCGCCCGCCTCGCC
TTTCCGGCAGCTCCTGCAGCCGGCGCCCCGGCTGTGCGCCCGGCCCTTCGGGCTGCTCAGCGTGCGCGCAGGTTCCGAGC
GGCGGCCGGGCCTCCTGCGGCCTCGCGGACCCTGCGCCTGTGGCTGTGGCTGCGGCTTGCTGCACACCGAAGGAGACAAA
GCTTTTGTTGATTTCCTGAGTGATGAAATTAAGGAGGAAAGAAAAATCCAGAAGCATAAAACCCTCCCTAAGATGTCTGG
AGGTTGGGAGCTGGAACTGAATGGGACAGAAGCGAAATTAGTGCGGAAAGTTGCCGGGGAAAAAATCACTGTCACTTTCA
ACATTAACAACAGCATCCCACCAACATTTGATGGTGAGGAGGAACCCTCGCAAGGGCAGAAGGTTGAAGAACAGGAGCCT
GAACTGACATCAACTCCCAATTTCGTGGTTGAAGTTATAAAGAATGATGGCAAGAAGGCCCTTGTGTTGGACTGTCATTA
TCCAGAGGATGAGGTTGGACAAGAAGATGAGGCTGAGAGTGACATCTTCTCTATCAGGGAAGTTAGCTTTCAGTCCACTG
GCGAATCTGAATGGAAGGATACTAATTATACACTCAACACGGATTCCTTGGACTGGGCCTTATATGACCACCTAATGGAT
TTCCTTGCCGACCGAGGGGTGGACAACACTTTTGCAGATGAGTTGGTGGAGCTCAGCACAGCCCTGGAGCACCAGGAGTA
CATTACTTTTCTTGAAGACCTCAAGAGTTTTGTCAAGAGCCAGTAG
ATGCTTCCTTTGCTGCGCTGTGTGTCCCGTGTGCTGGGCTCCTCCGTCGCCCGCCTCCGCGCTGCCGCGCCCGCCTCGCC
TTTCCGGCAGCTCCTGCAGCCGGCGCCCCGGCTGTGCGCCCGGCCCTTCGGGCTGCTCAGCGTGCGCGCAGGTTCCGAGC
GGCGGCCGGGCCTCCTGCGGCCTCGCGGACCCTGCGCCTGTGGCTGTGGCTGCGGCTTGCTGCACACCGAAGGAGACAAA
GCTTTTGTTGATTTCCTGAGTGATGAAATTAAGGAGGAAAGAAAAATCCAGAAGCATAAAACCCTCCCTAAGATGTCTGG
AGGTTGGGAGCTGGAACTGAATGGGACAGAAGCGAAATTAGTGCGGAAAGTTGCCGGGGAAAAAATCACTGTCACTTTCA
ACATTAACAACAGCATCCCACCAACATTTGATGGTGAGGAGGAACCCTCGCAAGGGCAGAAGGTTGAAGAACAGGAGCCT
GAACTGACATCAACTCCCAATTTCGTGGTTGAAGTTATAAAGAATGATGGCAAGAAGGCCCTTGTGTTGGACTGTCATTA
TCCAGAGGATGAGGTTGGACAAGAAGATGAGGCTGAGAGTGACATCTTCTCTATCAGGGAAGTTAGCTTTCAGTCCACTG
GCGAATCTGAATGGAAGGATACTAATTATACACTCAACACGGATTCCTTGGACTGGGCCTTATATGACCACCTAATGGAT
TTCCTTGCCGACCGAGGGGTGGACAACACTTTTGCAGATGAGTTGGTGGAGCTCAGCACAGCCCTGGAGCACCAGGAGTA
CATTACTTTTCTTGAAGACCTCAAGAGTTTTGTCAAGAGCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 13 .60 RPM |
| SRP007412_cerebellum | 9 .00 RPM |
| SRP007412_heart | 11 .50 RPM |
| SRP007412_kidney | 18 .23 RPM |
| SRP007412_liver | 13 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000006043 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000011352 | ortholog_one2one | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000008887 | ortholog_one2one | 3 retrogenes | |
| Felis catus | ENSFCAG00000026474 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000108561 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000002745 | ortholog_one2one | 5 retrogenes | |
| Macropus eugenii | ENSMEUG00000014882 | ortholog_one2one | 13 retrogenes | |
| Macaca mulatta | ENSMMUG00000006592 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009081 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000001610 | ortholog_one2one | 5 retrogenes | |
| Ochotona princeps | ENSOPRG00000013150 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000008631 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002466 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002441 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_670 | 76.83 | 56.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1222 | 65.97 | 82.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1385 | 84.28 | 55.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1413 | 84.19 | 75.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1866 | 74.63 | 70.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_1868 | 75.88 | 69.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000007870 retrocopies