Parental gene: | DCAF4, ENSPTRG00000006507 |
| Aliases: | DCAF4, WDR21A |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 14:72174189..72207421(+) |
>ENSPTRG00000006507
ATGAAAAAAAGTCGCTGGCAGAGTAGAAGAAGACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAGACTCCGTGA
TTCTGAAGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCAGCCACGGTGATGACGAGTCTCCGTCAACCT
CGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAGCTACCTGGGTTTTACTTTGACCCTGAAAAGAAACGCTACTTCCGC
TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCG
GCTGCTCCAGGAAGAAGACAGACGGAAAAAGATTGCCAGGATGGGATTTAATGCATCTTCCATGCTACGAAAAAGCCAGC
TGGGTTTTCTCAACGTCACCAATTACTGCCATTTAGCCCACGAGCTGCGTCTCAGCTGCATGGAGAGGAAAAAGGTCCAG
ATTCGAAGCATGGATCCCTCCGCCTTGGCAAGCGACCGATTTAACCTCATACTGGCAGATACCAACAGTGACCGGCTCTT
CACAGTGAACGATGTTAAAGTCGGAGGCTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGG
TGTTCATGCACGAAAACCTCTACTTCACCAACCGGAAGGTGAACTCGGTGTGCTGGGCCTCGCTGAATCACTTGGATTCC
CACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTGCTCCCAGCATCACTGTTTGTCAATAG
TCACCCAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTCCTGTGCCTGGTCCCTGAATA
TCCAAGCAAATAACTGCTTCAGTACAGGCTTGTCTCGGCGGGTCCTGTTGACCAACGTGGTGACGGGACACCGGCAGTCC
TTTGGGACCAACAGTGATGTCTTGGCCCAGCAGTTTGCTCTCATGGCTCCTCTGCTGTTTAATGGCTGCCGCTCTGGGGA
AATCTTTGCCATTGATCTGCGTTGTGGAAATCAAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATGATTCAGCAGTGA
CCTCTGTGCGGATCCTCCAAGATGAGCAATACCTGATGGCTTCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTGAGG
ACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGTGAATGAGTACGCCTACCTGCCCCTGCATGTGCACGAGGAAGAAGG
AATCCTGGTGGCAGTGGGCCAGGACTGCTACACGAGAATCTGGAGCCTCCACGATGCCCGCCTACTGAGAACCATACCCT
CCCCGTACGCTGCCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGTCGCGGCTGGGGGGCTCCCGGGGCGCGCCGGGG
CTGCTCATGGCTGTCGGGCAGGACCTTTACTGTTACTCCTACAGCTAA
ATGAAAAAAAGTCGCTGGCAGAGTAGAAGAAGACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAGACTCCGTGA
TTCTGAAGACAGGTCTGACTCCCGGGCAGCACAGCCCGCTCACGATTCCAGCCACGGTGATGACGAGTCTCCGTCAACCT
CGTCTGGCACAGCTGGGACCTCCTCTGTGCCAGAGCTACCTGGGTTTTACTTTGACCCTGAAAAGAAACGCTACTTCCGC
TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCG
GCTGCTCCAGGAAGAAGACAGACGGAAAAAGATTGCCAGGATGGGATTTAATGCATCTTCCATGCTACGAAAAAGCCAGC
TGGGTTTTCTCAACGTCACCAATTACTGCCATTTAGCCCACGAGCTGCGTCTCAGCTGCATGGAGAGGAAAAAGGTCCAG
ATTCGAAGCATGGATCCCTCCGCCTTGGCAAGCGACCGATTTAACCTCATACTGGCAGATACCAACAGTGACCGGCTCTT
CACAGTGAACGATGTTAAAGTCGGAGGCTCCAAGTATGGTATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTCAAGG
TGTTCATGCACGAAAACCTCTACTTCACCAACCGGAAGGTGAACTCGGTGTGCTGGGCCTCGCTGAATCACTTGGATTCC
CACATTCTGCTATGCCTCATGGGACTCGCAGAGACTCCAGGCTGTGCCACCCTGCTCCCAGCATCACTGTTTGTCAATAG
TCACCCAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTCCTGTGCCTGGTCCCTGAATA
TCCAAGCAAATAACTGCTTCAGTACAGGCTTGTCTCGGCGGGTCCTGTTGACCAACGTGGTGACGGGACACCGGCAGTCC
TTTGGGACCAACAGTGATGTCTTGGCCCAGCAGTTTGCTCTCATGGCTCCTCTGCTGTTTAATGGCTGCCGCTCTGGGGA
AATCTTTGCCATTGATCTGCGTTGTGGAAATCAAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATGATTCAGCAGTGA
CCTCTGTGCGGATCCTCCAAGATGAGCAATACCTGATGGCTTCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTGAGG
ACCACGAAGTGCGTAAGGCAGTACGAAGGCCACGTGAATGAGTACGCCTACCTGCCCCTGCATGTGCACGAGGAAGAAGG
AATCCTGGTGGCAGTGGGCCAGGACTGCTACACGAGAATCTGGAGCCTCCACGATGCCCGCCTACTGAGAACCATACCCT
CCCCGTACGCTGCCTCCAAGGCCGACATTCCCAGTGTGGCCTTCTCGTCGCGGCTGGGGGGCTCCCGGGGCGCGCCGGGG
CTGCTCATGGCTGTCGGGCAGGACCTTTACTGTTACTCCTACAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 5 .72 RPM |
| SRP007412_cerebellum | 4 .19 RPM |
| SRP007412_heart | 1 .66 RPM |
| SRP007412_kidney | 5 .78 RPM |
| SRP007412_liver | 4 .22 RPM |
| SRP007412_testis | 11 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000013878 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000119599 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003815 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000003625 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002449 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_46 | 77.27 | 79.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2774 | 72.91 | 81.82 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000006507 retrocopies