Parental gene: | DCAF4, ENSMMUG00000003625 |
| Aliases: | DCAF4, WDR21A |
| Description: | DDB1- and CUL4-associated factor 4 [Source:RefSeq peptide;Acc:NP_001245043] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 7:136018932..136053654(+) |
>ENSMMUG00000003625
ATGAATAAAAGTAGCTGGCAGAGTAGAAGAAGACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAGACTCCGTGA
TCCTGAAGACAGGTCCGACTCCCAGGCAGCACGGTCGGCTCAGGATTCCAGCCACGGTGATGATGAGTCTCCGTCGACCT
CGTCTGGCACAGCTGGGGCCTCCTCTGTGCCGGAGCTACCTGGGTTTTACTTTGACCCTGAAAAGAAACGCTACTTCCGC
TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCG
GCTGCTTGAGGAAGAGGACAAGCAGAAAAAGATTGCCAGGATGGGATTTAATGCATCTTCCATGCTCCGAAAAAGCCAAC
TGGGTTTTCTCAACGTCACCAGTTATTGCCATTTAGCCCACGAGCTGCGTCTCAGCTGCATGGAGAGGAAAAAGGTCCAG
ATTCGGAGCTTGGATCCCTCTGCCTTGGCAAGCGACCGATTTAACCTCATACTGGCAGATACCAACAGTGACCGGCTCTT
CACAGTGAACGATGTCAAAGTCGGAGGCTCCAAGTATGGCATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTTAAGG
TGTTCATGCACGAAAACCTCTACTTCACCAACCGGAAGGTGAATTCGGTGTGCTGGGCCTCGCTCAATCACTTGGATTCC
CACATTCTGCTGTGCCTCATGGGACTCGCGGAGACTCCAGGCTGCGCGACCCTGCTCCCAGCGTCACTGTTCGTCAATAG
TCACCCAGCAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTCCTGTGCCTGGTCCCTGA
ATATCCAAGCAAATAACTGCTTCAGTACAGGCTTGTCTCGGCGGGTCCTGTTGACCAACGTGGTGACGGGACACCGGCAG
TCCTTTGGGACCAACAGTGATGTCTTGGTTCCTCTGCTGTTTAATGGCTGCCGCTCTGGGGAAATCTTTGCCATTGATCT
GCGTTGTGGAAATCAAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATGACTCAGCAGTGACCTCTGTGCGGATCCTCC
AAGATGAGCAATACCTGATGGCATCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTGAGGACCACTAAGTGCATAAGG
CAGTACGAAGGCCACGTGAATGAGTATGCCTACCTGCCCCTGCATGTGCACGAGGAAGAAGGAATCCTGGTGGCAGTGGG
GCAGGACTGCTACACGAGAATCTGGAGCCTCCACGATGCCCACCTACTCAGAACCATACCCTCCCCGTACCCTGCCTCCA
AGGCCGACATTCCTAGTGTGGCCTTCTCGTCGCGGCTGGGGGGCTCCCGGGGCGCGCCGGGGCTGCTCATGGCTGTCGGG
CAGGACCTTTACTGTTACTCCTACAGCTAA
ATGAATAAAAGTAGCTGGCAGAGTAGAAGAAGACATGGGAGAAGAAGCCACCAGCAGAACCCTTGGTTCAGACTCCGTGA
TCCTGAAGACAGGTCCGACTCCCAGGCAGCACGGTCGGCTCAGGATTCCAGCCACGGTGATGATGAGTCTCCGTCGACCT
CGTCTGGCACAGCTGGGGCCTCCTCTGTGCCGGAGCTACCTGGGTTTTACTTTGACCCTGAAAAGAAACGCTACTTCCGC
TTGCTCCCTGGACATAACAACTGCAACCCCCTGACGAAAGAGAGCATCCGGCAGAAGGAGATGGAGAGCAAGAGACTGCG
GCTGCTTGAGGAAGAGGACAAGCAGAAAAAGATTGCCAGGATGGGATTTAATGCATCTTCCATGCTCCGAAAAAGCCAAC
TGGGTTTTCTCAACGTCACCAGTTATTGCCATTTAGCCCACGAGCTGCGTCTCAGCTGCATGGAGAGGAAAAAGGTCCAG
ATTCGGAGCTTGGATCCCTCTGCCTTGGCAAGCGACCGATTTAACCTCATACTGGCAGATACCAACAGTGACCGGCTCTT
CACAGTGAACGATGTCAAAGTCGGAGGCTCCAAGTATGGCATCATCAACCTGCAAAGTCTGAAGACCCCTACGCTTAAGG
TGTTCATGCACGAAAACCTCTACTTCACCAACCGGAAGGTGAATTCGGTGTGCTGGGCCTCGCTCAATCACTTGGATTCC
CACATTCTGCTGTGCCTCATGGGACTCGCGGAGACTCCAGGCTGCGCGACCCTGCTCCCAGCGTCACTGTTCGTCAATAG
TCACCCAGCAGGAATAGACCGGCCTGGCATGCTCTGCAGTTTCCGGATCCCTGGTGCCTGGTCCTGTGCCTGGTCCCTGA
ATATCCAAGCAAATAACTGCTTCAGTACAGGCTTGTCTCGGCGGGTCCTGTTGACCAACGTGGTGACGGGACACCGGCAG
TCCTTTGGGACCAACAGTGATGTCTTGGTTCCTCTGCTGTTTAATGGCTGCCGCTCTGGGGAAATCTTTGCCATTGATCT
GCGTTGTGGAAATCAAGGCAAGGGATGGAAGGCCACCCGCCTGTTTCATGACTCAGCAGTGACCTCTGTGCGGATCCTCC
AAGATGAGCAATACCTGATGGCATCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTGAGGACCACTAAGTGCATAAGG
CAGTACGAAGGCCACGTGAATGAGTATGCCTACCTGCCCCTGCATGTGCACGAGGAAGAAGGAATCCTGGTGGCAGTGGG
GCAGGACTGCTACACGAGAATCTGGAGCCTCCACGATGCCCACCTACTCAGAACCATACCCTCCCCGTACCCTGCCTCCA
AGGCCGACATTCCTAGTGTGGCCTTCTCGTCGCGGCTGGGGGGCTCCCGGGGCGCGCCGGGGCTGCTCATGGCTGTCGGG
CAGGACCTTTACTGTTACTCCTACAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .28 RPM |
| SRP007412_brain | 5 .38 RPM |
| SRP007412_cerebellum | 5 .23 RPM |
| SRP007412_heart | 3 .53 RPM |
| SRP007412_kidney | 11 .15 RPM |
| SRP007412_liver | 5 .23 RPM |
| SRP007412_testis | 9 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000013878 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000119599 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003815 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002449 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000006507 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_152 | 78.03 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_264 | 76.14 | 99.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003625 retrocopies