Parental gene:

ENSCPOG00000013878

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:17190585..17209905(+)


>ENSCPOG00000013878
ATGAATAAAAGCAGCAGGCAGAGTAGGAAAAGATATGGGAGAAGAAGCCACCCACAGAACTCTTGGTTCAGACAGCACAG
TTCCAGTGAGAGGTGTACAACAGGGGCACAGCAGAGAGCTCAGGATTCTGACCACAGTGATGAGGAGTGCCCCTCGGCCT
CATCCAACACTACTGGGGATACTTCTGCACCAGATCTACCAGGGTATTATTTTGATCCTGAAAAGAACCGCTACTTCCGC
TTGCTCCCGGGACATAACAACTGCAACCCCCTCACAAAAGAGAGCATCCGGCAAAAGGAAATGGAGAGCAAAAGGCTGCA
ACTGCTAGAAGAAGAGGAAAAGAAGAAAAAGAAAGCGGCCAGAATGGGATTTAATACATCCTCCTTCCTACGGAAAAGCC
AGCTGGGTTTTCTCAACTTCACTGGTTACTGCCGCTTAGCCCATGAGCTGCGAGTGAGCTGCATGGAGAAGAAAAAGGTT
CACATTCAGAGCGCAGAGTCCTCCACTGTGATAAGCGACCCATTCAGCCTCATCTTGGCGGATACCAACAGTGACCGACT
CTTCACAGTGAACGATGTTGATGTTGGAGGCTCAAAGTATGGTGTCATCAACTTGAGTGGTCTAAAGACTCCTGCACTTG
AGGTGCACATGCATAAAAACTTCTACTTCACCAACCGCAAGGTGAATTCTGTATGCTGGGCTTCACTGAACCACTTGGAT
TCCCACGTTCTGCTATGCCTCTTGGGATTTGCAGAGACTCCGGGCTGTGCCACTCTGATCCCAGCATCACTGTTCACCAG
TAGTCACCCAGGTGTGGACCGCCGTGGCATGCTTTGCAGTTTCCGGATCCCTGGTGCCTGGTCCTGTGCATGGTGCCTGA
ACGTCCAGGCAAACACTTGCTTCAGTACTGGCTTGTCTCGGCGGATCCTGTTGACCGATGTAGTGACAGGACACCGACAG
TCATACAAGACCAACAGTGATGTCTTGGCCCAGCAGTTTGCTATCTTGACTCCTTTGTTGTTTAATGGCTGCCGCTCTGG
GGAGATCTTTGCCATTGATCTGCGTTCTCGAAGTCAGGGCAAGAGCTGGAAGACCACCTGCCTATTCCATGACTCAGCAG
TGACTTCTTTGCGGATCCTTCAGGAAGAACAATCTATATTGGCATCAGACATGGCTGGAAAGATCAAGCTGTGGGACCTG
AGGAACAAGAAGTGTATAAGGCAGTACGAAGGTCACGTGAATGAGTATGCCTGCCTGCCCTTGCATGTGCATGAGGAAGA
AGGGATCCTGGTGGCAGTGGGCCAAGATTGCTACACAAGAATCTGGAGCCTCCATGATGCCCACCTGCTCAGAACCATAC
CCTCCCCGTACCCCACCTCCAAGGCTGACATTCCCAGTGTGGCCTTCTCGTCTCAGTTTGGAGGAGTCCAAGGATCCCCA
GGGTTGCTCATGGCGGTCAGGCAGGACCTTTACTATTTCTCCTACAGCTAA

Library Parental gene expression (RPM)
SRP017611_liver 23 .37 RPM
SRP017611_kidney 51 .92 RPM
SRP017611_brain 46 .88 RPM
SRP040447_lung 60 .23 RPM
SRP040447_skeletal_muscle 31 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000119599 ortholog_one2many 2 retrogenes
retro_hsap_101, retro_hsap_92,
Gorilla gorilla ENSGGOG00000003815 ortholog_one2one 2 retrogenes
retro_ggor_2026, retro_ggor_2743,
Macaca mulatta ENSMMUG00000003625 ortholog_one2many 2 retrogenes
retro_mmul_152, retro_mmul_264,
Nomascus leucogenys ENSNLEG00000002449 ortholog_one2one 2 retrogenes
retro_nleu_1912, retro_nleu_833,
Pan troglodytes ENSPTRG00000006507 ortholog_one2many 2 retrogenes
retro_ptro_2774, retro_ptro_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_293 68.68 69.35
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Download FASTA sequences of all ENSCPOG00000013878 retrocopies