Parental gene: | DDX6, ENSPPYG00000003942 |
| Aliases: | None |
| Description: | probable ATP-dependent RNA helicase DDX6 [Source:RefSeq peptide;Acc:NP_001128971] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 11:115683399..115723023(-) |
>ENSPPYG00000003942
ATGAGCACGGCCAGAACAGAGAACCCTGTTATAATGGGTCTGTCCAGTCAAAATGGTCAGCTGAGAGGCCCTGTGAAACC
CACTGGTGGCCCTGGAGGAGGGGGCACACAGACACAGCAACAGATGAACCAGCTGAAAAACACCAACACAATCAATAATG
GCACTCAGCAGCAAGCACAGAGTATGACCACCACTATTAATGCAATGATAAATTTTCTTAAACACGTAAATTTACCAAAG
GACACCAAATTTACCAACAGTGATGTGACCTCCACAAAAGGAAATGAGTTTGAAGATTACTGTTTGAAAAGGGAGTTACT
GATGGGAATTTTTGAAATGGGCTGGGAAAAGCCATCTCCTATTCAGGAGGAGAGCATTCCCATTGCTTTATCTGGTAGGG
ATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGACCTGAAG
AAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAAATTTGCATCCAGGTCAG
CAAACACATGGGAGGGGCCAAAGTGATGGCAACCACAGGAGGAACCAATTTACGAGATGACATAATGAGGCTTGATGATA
CAGTGCACGTGGTGATTGCTACCCCTGGGAGAATCCTGGATCTTATTAAGAAAGGAGTAGCAAAGGTTGATCATGTCCAG
ATGATAGTATTGGATGAGGCAGATAAGTTGCTGTCACAGGATTTTGTGCAGATAATGGAGGATATTATTCTCACGCTACC
TAAAAACAGGCAGATTTTACTATATTCCGCTACTTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCCATTTGCAGAAAC
CCTATGAGATTAACCTGATGGAGGAACTAACTCTGAAGGGAGTAACCCAGTACTACGCATATGTAACTGAGCGCCAAAAA
GTACACTGCCTCAACACACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTGTAACTCCTCTCAGCGAGTTGA
ATTGCTAGCCAAGAAGATTTCTCAACTGGGTTATTCTTGCTTCTATATTCATGCTAAGATGAGGCAGGAACATCGAAATC
GTGTATTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGATCTGTTTACCCGAGGTATTGATATACAA
GCTGTGAATGTGGTAATAAACTTTGATTTCCCAAAGCTGGCAGAGACCTATCTCCATCGTATTGGAAGATCAGGTCGCTT
TGGTCATCTTGGCTTAGCCATCAACTTGATCACATATGATGATCGCTTCAACCTGAAAAGTATTGAGGAGCAGCTGGGAA
CAGAAATTAAACCTATTCCGAGCAACATTGATAAGAGCCTGTATGTGGCAGAATACCACAGCGAGCCTGTAGAAGATGAG
AAACCTTAA
ATGAGCACGGCCAGAACAGAGAACCCTGTTATAATGGGTCTGTCCAGTCAAAATGGTCAGCTGAGAGGCCCTGTGAAACC
CACTGGTGGCCCTGGAGGAGGGGGCACACAGACACAGCAACAGATGAACCAGCTGAAAAACACCAACACAATCAATAATG
GCACTCAGCAGCAAGCACAGAGTATGACCACCACTATTAATGCAATGATAAATTTTCTTAAACACGTAAATTTACCAAAG
GACACCAAATTTACCAACAGTGATGTGACCTCCACAAAAGGAAATGAGTTTGAAGATTACTGTTTGAAAAGGGAGTTACT
GATGGGAATTTTTGAAATGGGCTGGGAAAAGCCATCTCCTATTCAGGAGGAGAGCATTCCCATTGCTTTATCTGGTAGGG
ATATCTTAGCTAGAGCAAAAAATGGAACAGGCAAGAGCGGTGCCTACCTCATTCCCTTACTTGAACGGCTAGACCTGAAG
AAGGACAATATACAAGCAATGGTGATTGTTCCCACTAGAGAACTTGCTCTACAGGTCAGTCAAATTTGCATCCAGGTCAG
CAAACACATGGGAGGGGCCAAAGTGATGGCAACCACAGGAGGAACCAATTTACGAGATGACATAATGAGGCTTGATGATA
CAGTGCACGTGGTGATTGCTACCCCTGGGAGAATCCTGGATCTTATTAAGAAAGGAGTAGCAAAGGTTGATCATGTCCAG
ATGATAGTATTGGATGAGGCAGATAAGTTGCTGTCACAGGATTTTGTGCAGATAATGGAGGATATTATTCTCACGCTACC
TAAAAACAGGCAGATTTTACTATATTCCGCTACTTTCCCTCTTAGTGTACAGAAGTTCATGAATTCCCATTTGCAGAAAC
CCTATGAGATTAACCTGATGGAGGAACTAACTCTGAAGGGAGTAACCCAGTACTACGCATATGTAACTGAGCGCCAAAAA
GTACACTGCCTCAACACACTTTTCTCCAGGCTTCAGATAAACCAGTCGATCATTTTCTGTAACTCCTCTCAGCGAGTTGA
ATTGCTAGCCAAGAAGATTTCTCAACTGGGTTATTCTTGCTTCTATATTCATGCTAAGATGAGGCAGGAACATCGAAATC
GTGTATTTCATGATTTCCGAAATGGCTTATGCCGCAATCTTGTTTGCACTGATCTGTTTACCCGAGGTATTGATATACAA
GCTGTGAATGTGGTAATAAACTTTGATTTCCCAAAGCTGGCAGAGACCTATCTCCATCGTATTGGAAGATCAGGTCGCTT
TGGTCATCTTGGCTTAGCCATCAACTTGATCACATATGATGATCGCTTCAACCTGAAAAGTATTGAGGAGCAGCTGGGAA
CAGAAATTAAACCTATTCCGAGCAACATTGATAAGAGCCTGTATGTGGCAGAATACCACAGCGAGCCTGTAGAAGATGAG
AAACCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 133 .80 RPM |
| SRP007412_cerebellum | 215 .11 RPM |
| SRP007412_heart | 63 .76 RPM |
| SRP007412_kidney | 98 .71 RPM |
| SRP007412_liver | 45 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012442 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013591 | ortholog_one2one | 3 retrogenes | |
| ENSG00000110367 | ortholog_one2one | 0 retrogenes |
|
|
| Gorilla gorilla | ENSGGOG00000016751 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018651 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000032097 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007372 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007978 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004353 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000012453 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1018 | 88.10 | 51.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2941 | 75.52 | 68.88 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000003942 retrocopies