Parental gene:

ANAPC15, ENSPPYG00000003646

Aliases:None
Description:anaphase promoting complex subunit 15 [Source:HGNC Symbol;Acc:24531]
Organism:Orangutan (Pongo abelii)
Coordinates:11:67338705..67340099(-)


>ENSPPYG00000003646
ATGTCCACTTTGTTCCCCTCACTCTTCCCTCGTGTGACTGAGACACTGTGGTTTAATCTGGATCGACCCTGTGTGGAAGA
GACAGAGCTGCAGCAGCAGGAACAGCAGCATCAGGCCTGGCTCCAAAGCATCGCAGAGAAAGACAACAACCTGGTTCCTA
TTGGCAAGCCAGCCTCAGAGCACTATGATGACGAGGAAGAAGAGGATGATGAAGACGATGAAGATAGTGAAGAGGACTCA
GAGGATGATGAGGACATGCAGGACATGGATGAGATGAATGACTACAATGAGTCACCGGATGATGGAGAGGTCAATGAGGT
GGACATGGAAGGCAACGAACAGGATCAGGACCAGTGGATGATCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .05 RPM
SRP007412_cerebellum 0 .97 RPM
SRP007412_heart 0 .96 RPM
SRP007412_kidney 2 .12 RPM
SRP007412_liver 0 .52 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010843 ortholog_one2one 1 retrogene
retro_amel_298,
Bos taurus ENSBTAG00000002999 ortholog_one2one 2 retrogenes
retro_btau_252, retro_btau_269,
Canis familiaris ENSCAFG00000005781 ortholog_one2one 1 retrogene
retro_cfam_1752,
Equus caballus ENSECAG00000021041 ortholog_one2one 1 retrogene
retro_ecab_470,
Felis catus ENSFCAG00000005321 ortholog_one2one 1 retrogene
retro_fcat_1350,
Homo sapiens ENSG00000110200 ortholog_one2one 1 retrogene
retro_hsap_4780,
Myotis lucifugus ENSMLUG00000014120 ortholog_one2many 1 retrogene
retro_mluc_238,
Macaca mulatta ENSMMUG00000016270 ortholog_one2one 1 retrogene
retro_mmul_2551,
Mustela putorius furo ENSMPUG00000010260 ortholog_one2one 1 retrogene
retro_mputfur_596,
Nomascus leucogenys ENSNLEG00000017234 ortholog_one2one 1 retrogene
retro_nleu_1100,
Pteropus vampyrus ENSPVAG00000015797 ortholog_one2one 1 retrogene
retro_pvam_404,
Sorex araneus ENSSARG00000004171 ortholog_one2one 2 retrogenes
retro_sara_444, retro_sara_686,
Tarsius syrichta ENSTSYG00000014179 ortholog_one2many 1 retrogene
retro_tsyr_35,
Tursiops truncatus ENSTTRG00000010773 ortholog_one2one 1 retrogene
retro_ttru_277,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2388 56.14 92.56
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2. retro_pabe_3720 87.83 95.04
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Download FASTA sequences of all ENSPPYG00000003646 retrocopies