Parental gene: | CAP1, ENSPPYG00000001496 |
| Aliases: | None |
| Description: | adenylyl cyclase-associated protein 1 [Source:RefSeq peptide;Acc:NP_001126158] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:190045922..190081013(-) |
>ENSPPYG00000001496
ATGGCTGACATGCAAAATCTGGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGACAT
GCACCGTGGGTATGGAGACAGTCCTTCAAAAGCAGGAGCAGCTCCATATGTGCAGGTATTTGACTCGCTGCTTGCTGGTC
CTGTGGCAGAGTACTTGAAGATCAGTAAAGAGATTGGGGGAGATGTGCAGAAACATGCGGAGATGGTCCACACAGGTTTG
AAGTTGGAGCGAGCTCTGTTGGTTACAGCTTCTCAGTGTCAACAGCCAGCAGATAATAAGCTTTCCGATTTGTTGGCACC
CATCTCAGAGCAGATCAAAGAAGTGATAACCTTTCGGGAGAAGAACCGAGGCAGCAAGTTGTTTAATCACCTGTCAGCTG
TCAGCGAAAGTATCCAGGCCCTAGGCTGGGTGGCTATGGCTCCCAAGCCTGGCCCTTATGTGAAAGAAATGAATGATGCT
GCCATGTTTTATACAAACCGAGTCCTCAAAGAGTACAAAGATGTGGATAAGAAGCATGTAGACTGGGTCAAAGCTTATTT
AAGTATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAAAACGGGGCCTGTGG
CAAAAGAACTGAGTGGACTGCCATCTGGACCCTCTGCCGGATCAGGTCCTCCTCCCCCTCCACCAGGCCCCCCTCCTCCC
CCAGTCTCTACCAGTTCAGGCTCAGATGAGTCCGCTTCCCGCTCAGCACTGTTCGCGCAGATTAATCAGGGGGAGAGCAT
TACACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAGGCTCAGAGTGGTCCACTAC
GCAGTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACCAGCCAATCCCCCAAACCAGCCACAAAGAAGGAGCCAGCT
GTACTTGAACTGGAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAAAATGTTTCCAACCTGGTGATTGAGGACACAGAGCT
GAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATA
ACTGTAAGAAGCTTGGTCTGGTATTCGATGACGTGGTGGGCATTGTGGAGATAATCAACAGTAGGGATGTCAAAGTTCAG
GTAATGGGTAAAGTGCCAACCATATCCATCAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTG
TGAAATAGTCAGTGCCAAATCTTCCGAGATGAACGTCCTCATTCCTACAGAAGGCGGTGACTTTAATGAATTCCCAGTTC
CTGAGCAGTTCAAGACCCTATGGAATGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA
ATGGCTGACATGCAAAATCTGGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTATCTCATACCTCTGACAT
GCACCGTGGGTATGGAGACAGTCCTTCAAAAGCAGGAGCAGCTCCATATGTGCAGGTATTTGACTCGCTGCTTGCTGGTC
CTGTGGCAGAGTACTTGAAGATCAGTAAAGAGATTGGGGGAGATGTGCAGAAACATGCGGAGATGGTCCACACAGGTTTG
AAGTTGGAGCGAGCTCTGTTGGTTACAGCTTCTCAGTGTCAACAGCCAGCAGATAATAAGCTTTCCGATTTGTTGGCACC
CATCTCAGAGCAGATCAAAGAAGTGATAACCTTTCGGGAGAAGAACCGAGGCAGCAAGTTGTTTAATCACCTGTCAGCTG
TCAGCGAAAGTATCCAGGCCCTAGGCTGGGTGGCTATGGCTCCCAAGCCTGGCCCTTATGTGAAAGAAATGAATGATGCT
GCCATGTTTTATACAAACCGAGTCCTCAAAGAGTACAAAGATGTGGATAAGAAGCATGTAGACTGGGTCAAAGCTTATTT
AAGTATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAAAACGGGGCCTGTGG
CAAAAGAACTGAGTGGACTGCCATCTGGACCCTCTGCCGGATCAGGTCCTCCTCCCCCTCCACCAGGCCCCCCTCCTCCC
CCAGTCTCTACCAGTTCAGGCTCAGATGAGTCCGCTTCCCGCTCAGCACTGTTCGCGCAGATTAATCAGGGGGAGAGCAT
TACACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAGGCTCAGAGTGGTCCACTAC
GCAGTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACCAGCCAATCCCCCAAACCAGCCACAAAGAAGGAGCCAGCT
GTACTTGAACTGGAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAAAATGTTTCCAACCTGGTGATTGAGGACACAGAGCT
GAAACAGGTGGCTTACATATACAAGTGTGTCAACACGACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATA
ACTGTAAGAAGCTTGGTCTGGTATTCGATGACGTGGTGGGCATTGTGGAGATAATCAACAGTAGGGATGTCAAAGTTCAG
GTAATGGGTAAAGTGCCAACCATATCCATCAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAATTCCCTGGATTG
TGAAATAGTCAGTGCCAAATCTTCCGAGATGAACGTCCTCATTCCTACAGAAGGCGGTGACTTTAATGAATTCCCAGTTC
CTGAGCAGTTCAAGACCCTATGGAATGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 47 .33 RPM |
| SRP007412_cerebellum | 13 .86 RPM |
| SRP007412_heart | 11 .83 RPM |
| SRP007412_kidney | 28 .21 RPM |
| SRP007412_liver | 22 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003012 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000131236 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027527 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004960 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028656 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012077 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005492 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000583 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013492 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_584 | 83.92 | 64.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2212 | 88.81 | 91.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2358 | 93.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2415 | 88.56 | 91.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000001496 retrocopies