Parental gene: | Cap1, ENSMUSG00000028656 |
| Aliases: | None |
| Description: | CAP, adenylate cyclase-associated protein 1 (yeast) [Source:MGI Symbol;Acc:MGI:88262] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:122859046..122886056(-) |
>ENSMUSG00000028656
ATGGCTGACATGCAAAATCTTGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTGTCACATACTTCAGACAT
GCACTGTGGATATGGAGACAGCCCTTCAAAAGGAGCAGTTCCATATGTGCAAGCATTTGACTCGCTGCTTGCCAATCCCG
TGGCAGAGTACTTGAAGATGAGTAAGGAGATCGGGGGAGATGTGCAGAAACACGCGGAGATGGTCCACACAGGCCTGAAG
TTGGAGCGAGCTCTCCTGGCTACAGCTTCTCAGTGCCAGCAGCCAGCTGGTAATAAACTTTCTGATTTGTTGGCACCTAT
CTCGGAGCAGATCCAAGAAGTTATAACCTTCCGGGAGAAGAACCGAGGCAGCAAGTTTTTTAATCATCTATCTGCTGTCA
GTGAAAGCATCCAGGCCTTGGGCTGGGTGGCTCTGGCTGCGAAACCTGGCCCCTTTGTGAAAGAGATGAATGACGCGGCC
ATGTTTTACACAAATCGTGTCCTCAAGGAGTACAGAGATGTGGATAAGAAGCATGTGGACTGGGTCAGAGCTTACTTGAG
TATATGGACGGAGCTGCAGGCTTACATCAAGGAGTTTCATACTACTGGCCTGGCCTGGAGCAAGACGGGGCCTGTGGCAA
AAGAACTGAGTGGATTGCCATCTGGACCCTCTGTGGGATCAGGCCCACCTCCTCCCCCACCGGGCCCGCCTCCTCCCCCA
ATCTCTACCAGTTCTGGTTCTGACGACTCTGCATCACGCTCAGCACTGTTTGCACAGATTAATCAGGGGGAAAGCATCAC
ACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAAGCTCAGAGTGGTCCAGTTCGGA
GTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACTAGCCCCTCCCCCAAACCAGCCACAAAGAAGGAACCAGCTCTG
CTGGAACTGGAAGGCAAGAAATGGAGAGTGGAAAACCAGGAGAATGTTTCCAACCTGGTGATCGATGACACTGAGCTGAA
GCAGGTGGCTTACATCTACAAGTGTGTCAACACAACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATAACT
GTAAGAAGCTTGGCCTGGTGTTTGATGACGTGGTGGGCATTGTGGAGATAATCAATAGTAGGGATGTCAAAGTTCAGGTG
ATGGGAAAAGTGCCAACCATTTCCATTAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAACTCCCTGGACTGTGA
GATAGTCAGTGCCAAATCTTCTGAGATGAATGTCCTCATTCCTACCGAAGGCGGTGATTTTAACGAGTTCCCAGTCCCCG
AGCAGTTCAAGACCCTGTGGAACGGACAGAAGTTGGTCACCACAGTGACAGAAATCGCTGGATAA
ATGGCTGACATGCAAAATCTTGTAGAAAGATTGGAGAGGGCAGTGGGCCGCCTGGAGGCAGTGTCACATACTTCAGACAT
GCACTGTGGATATGGAGACAGCCCTTCAAAAGGAGCAGTTCCATATGTGCAAGCATTTGACTCGCTGCTTGCCAATCCCG
TGGCAGAGTACTTGAAGATGAGTAAGGAGATCGGGGGAGATGTGCAGAAACACGCGGAGATGGTCCACACAGGCCTGAAG
TTGGAGCGAGCTCTCCTGGCTACAGCTTCTCAGTGCCAGCAGCCAGCTGGTAATAAACTTTCTGATTTGTTGGCACCTAT
CTCGGAGCAGATCCAAGAAGTTATAACCTTCCGGGAGAAGAACCGAGGCAGCAAGTTTTTTAATCATCTATCTGCTGTCA
GTGAAAGCATCCAGGCCTTGGGCTGGGTGGCTCTGGCTGCGAAACCTGGCCCCTTTGTGAAAGAGATGAATGACGCGGCC
ATGTTTTACACAAATCGTGTCCTCAAGGAGTACAGAGATGTGGATAAGAAGCATGTGGACTGGGTCAGAGCTTACTTGAG
TATATGGACGGAGCTGCAGGCTTACATCAAGGAGTTTCATACTACTGGCCTGGCCTGGAGCAAGACGGGGCCTGTGGCAA
AAGAACTGAGTGGATTGCCATCTGGACCCTCTGTGGGATCAGGCCCACCTCCTCCCCCACCGGGCCCGCCTCCTCCCCCA
ATCTCTACCAGTTCTGGTTCTGACGACTCTGCATCACGCTCAGCACTGTTTGCACAGATTAATCAGGGGGAAAGCATCAC
ACATGCCCTGAAACATGTATCTGATGACATGAAGACTCACAAGAACCCTGCCCTGAAAGCTCAGAGTGGTCCAGTTCGGA
GTGGCCCCAAACCATTCTCTGCACCTAAACCCCAAACTAGCCCCTCCCCCAAACCAGCCACAAAGAAGGAACCAGCTCTG
CTGGAACTGGAAGGCAAGAAATGGAGAGTGGAAAACCAGGAGAATGTTTCCAACCTGGTGATCGATGACACTGAGCTGAA
GCAGGTGGCTTACATCTACAAGTGTGTCAACACAACATTGCAAATCAAGGGCAAAATTAACTCCATTACAGTAGATAACT
GTAAGAAGCTTGGCCTGGTGTTTGATGACGTGGTGGGCATTGTGGAGATAATCAATAGTAGGGATGTCAAAGTTCAGGTG
ATGGGAAAAGTGCCAACCATTTCCATTAACAAAACAGATGGCTGCCATGCTTACCTGAGCAAGAACTCCCTGGACTGTGA
GATAGTCAGTGCCAAATCTTCTGAGATGAATGTCCTCATTCCTACCGAAGGCGGTGATTTTAACGAGTTCCCAGTCCCCG
AGCAGTTCAAGACCCTGTGGAACGGACAGAAGTTGGTCACCACAGTGACAGAAATCGCTGGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 212 .21 RPM |
| SRP007412_cerebellum | 133 .74 RPM |
| SRP007412_heart | 52 .98 RPM |
| SRP007412_kidney | 136 .98 RPM |
| SRP007412_liver | 74 .83 RPM |
| SRP007412_testis | 120 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003012 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000131236 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027527 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004960 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012077 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005492 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001496 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000000583 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013492 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1265 | 69.42 | 58.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000028656 retrocopies