Parental gene:

NACA2, ENSOPRG00000001781

Aliases:None
Description:nascent polypeptide-associated complex alpha subunit 2 [Source:HGNC Symbol;Acc:23290]
Organism:Southern American pika (Ochotona princeps)
Coordinates:GeneScaffold_2477:447736..458350(-)


>ENSOPRG00000001781
ATGCCCGGTGAAGCCACAGAAACGGTCCCTGCTACTGAGCAGGAGTTGCCACAGCCCCAGGCTGAGACAGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGG
CCGCAGCAGCTGAAATCGATGAAGAACCTGTCAGTAAGGCGAAACAGAGTCGGAGTGAAAAGAAGGCACGGAAGGCTATG
TCCAAGCTGGGCCTGCGGCAAGTTACGGGGGTCACCAGAGTCACTATCCGGAAATCTAAGAATATCCTCTTTGTCATCAC
AAAACCCGACGTCTACAAGAGCCCAGCCTCAGACACCTACATCGTTTTTGGGGAAGCCAAGATTGAAGACTTATCTCAGC
AAGCACAACTAGCAGCAGCTGAGAAATTTAAAGTTCAAGGTGAAGCTGTCTCCAACATTCAGGAAAACACACAGACTCCA
ACTGTACAGGAGGAGAGTGAAGAGGAAGAGGTTGATGAAACAGGTGTGGAAGTTAAGGATATAGAGTTGGTCATGTCACA
AGCAAATGTTTCCAGAGCAAAGGCAGTCCGAGCCCTGAAGAACAACAGTAATGATATTGTAAATGCTATTATGGAATTAA
CAATGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004175 possible_ortholog 3 retrogenes
retro_amel_1725, retro_amel_1821, retro_amel_643,
Canis familiaris ENSCAFG00000000141 possible_ortholog 8 retrogenes
retro_cfam_1502, retro_cfam_1561, retro_cfam_1884, retro_cfam_1913, retro_cfam_2096, retro_cfam_2169, retro_cfam_710, retro_cfam_974,
Callithrix jacchus ENSCJAG00000010701 possible_ortholog 8 retrogenes
retro_cjac_1063, retro_cjac_1452, retro_cjac_1875, retro_cjac_2202, retro_cjac_2453, retro_cjac_2696, retro_cjac_2975, retro_cjac_3232,
Dipodomys ordii ENSDORG00000014522 ortholog_one2one 2 retrogenes
retro_dord_228, retro_dord_699,
Homo sapiens ENSG00000196531 possible_ortholog 6 retrogenes
retro_hsap_3006, retro_hsap_3027, retro_hsap_3968, retro_hsap_3992, retro_hsap_737, retro_hsap_77,
Loxodonta africana ENSLAFG00000004598 possible_ortholog 6 retrogenes
retro_lafr_1107, retro_lafr_113, retro_lafr_1251, retro_lafr_166, retro_lafr_491, retro_lafr_958,
Microcebus murinus ENSMICG00000016465 ortholog_one2one 5 retrogenes
retro_mmur_1122, retro_mmur_450, retro_mmur_585, retro_mmur_684, retro_mmur_807,
Myotis lucifugus ENSMLUG00000001169 possible_ortholog 16 retrogenes
retro_mluc_1147, retro_mluc_1653, retro_mluc_1668, retro_mluc_1756, retro_mluc_1767, retro_mluc_1851, retro_mluc_1881, retro_mluc_1941, retro_mluc_2587, retro_mluc_2600, retro_mluc_414, retro_mluc_492, retro_mluc_526, retro_mluc_641, retro_mluc_725, retro_mluc_861,
Macaca mulatta ENSMMUG00000003073 possible_ortholog 4 retrogenes
retro_mmul_1233, retro_mmul_1933, retro_mmul_2066, retro_mmul_889,
Nomascus leucogenys ENSNLEG00000017449 possible_ortholog 7 retrogenes
retro_nleu_1358, retro_nleu_20, retro_nleu_2522, retro_nleu_478, retro_nleu_754, retro_nleu_839, retro_nleu_941,
Procavia capensis ENSPCAG00000007067 ortholog_one2one 5 retrogenes
retro_pcap_150, retro_pcap_224, retro_pcap_282, retro_pcap_305, retro_pcap_324,
Pongo abelii ENSPPYG00000004670 possible_ortholog 6 retrogenes
retro_pabe_2507, retro_pabe_26, retro_pabe_3279, retro_pabe_633, retro_pabe_656, retro_pabe_764,
Vicugna pacos ENSVPAG00000004028 possible_ortholog 2 retrogenes
retro_vpac_485, retro_vpac_611,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opri_264 69.57 52.09
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2. retro_opri_758 69.57 52.09
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3. retro_opri_961 75.46 73.49
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Download FASTA sequences of all ENSOPRG00000001781 retrocopies