Parental gene:

SUPT4H1, ENSOCUG00000025823

Aliases:None
Description:suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:29917531..29924222(+)


>ENSOCUG00000025823
ATGGCTCTGGAGACCGTACCGAAGGACCTGCGGCATCTACGGGCTTGTTTGCTGTGTTCGCTGGTCAAGACCATAGACCA
GTTTGAGTATGACGGCTGTGACAATTGTGATGCATACCTACAGATGAAGGGTAACCGAGAGATGGTATATGACTGCACCA
GCTCTTCCTTTGATGGAATCATTGCCATGATGAGTCCAGAAGACAGCTGGGTTTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTGTATGCGGTGTCAGTCACTGGTCGCCTGCCTCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACGGCTATAAAGACTTAG

Library Parental gene expression (RPM)
SRP017611_liver 7 .32 RPM
SRP017611_kidney 35 .98 RPM
SRP017611_brain 27 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017524 ortholog_one2one 2 retrogenes
retro_cfam_1399, retro_cfam_553,
Homo sapiens ENSG00000213246 ortholog_one2one 2 retrogenes
retro_hsap_1081, retro_hsap_2280,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Macaca mulatta ENSMMUG00000007579 ortholog_one2one 2 retrogenes
retro_mmul_1005, retro_mmul_842,
Mus musculus ENSMUSG00000020485 ortholog_one2one 2 retrogenes
retro_mmus_2857, retro_mmus_633,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pan troglodytes ENSPTRG00000009451 ortholog_one2one 2 retrogenes
retro_ptro_1614, retro_ptro_735,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1613 58.57 58.97
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2. retro_ocun_1636 77.12 100.00
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Download FASTA sequences of all ENSOCUG00000025823 retrocopies