Parental gene:

Supt4a, ENSMUSG00000020485

Aliases:Supt4a, AL022777, Supt4h, Supt4h1, Supt4h1a
Description:suppressor of Ty 4A [Source:MGI Symbol;Acc:MGI:107416]
Organism:Mouse (Mus musculus)
Coordinates:11:87737551..87743623(+)


>ENSMUSG00000020485
ATGGCCCTGGAGACGGTACCAAAGGACCTGCGGCATCTGCGGGCTTGTTTGCTGTGCTCGTTAGTCAAGACTATAGACCA
GTTCGAATATGATGGGTGTGACAATTGCGATGCATACCTACAAATGAAGGGCAACAGAGAGATGGTTTATGACTGCACCA
GCTCTTCATTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCTGTGTCCGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCAATAAAGACCTAG

Library Parental gene expression (RPM)
SRP007412_brain 16 .96 RPM
SRP007412_cerebellum 17 .85 RPM
SRP007412_heart 12 .89 RPM
SRP007412_kidney 20 .79 RPM
SRP007412_liver 14 .47 RPM
SRP007412_testis 11 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017524 ortholog_one2one 2 retrogenes
retro_cfam_1399, retro_cfam_553,
Homo sapiens ENSG00000213246 ortholog_one2one 2 retrogenes
retro_hsap_1081, retro_hsap_2280,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Macaca mulatta ENSMMUG00000007579 ortholog_one2one 2 retrogenes
retro_mmul_1005, retro_mmul_842,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Oryctolagus cuniculus ENSOCUG00000025823 ortholog_one2one 2 retrogenes
retro_ocun_1613, retro_ocun_1636,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pan troglodytes ENSPTRG00000009451 ortholog_one2one 2 retrogenes
retro_ptro_1614, retro_ptro_735,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_633 99.15 100.00
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2. retro_mmus_2857 82.05 100.00
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Download FASTA sequences of all ENSMUSG00000020485 retrocopies