Parental gene:

MMU.333, ENSMMUG00000007579

Aliases:None
Description:suppressor of Ty 4 homolog 1 [Source:RefSeq peptide;Acc:NP_001247588]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:42589555..42595380(-)


>ENSMMUG00000007579
ATGGCCCTGGAGACAGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCGCTGGTCAAGACTATAGACCA
GTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGAGAGATGGTATATGACTGCACCA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCGGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 22 .37 RPM
SRP007412_brain 16 .47 RPM
SRP007412_cerebellum 14 .98 RPM
SRP007412_heart 11 .60 RPM
SRP007412_kidney 11 .62 RPM
SRP007412_liver 12 .07 RPM
SRP007412_testis 22 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017524 ortholog_one2one 2 retrogenes
retro_cfam_1399, retro_cfam_553,
Homo sapiens ENSG00000213246 ortholog_one2one 2 retrogenes
retro_hsap_1081, retro_hsap_2280,
Gorilla gorilla ENSGGOG00000007232 ortholog_one2one 2 retrogenes
retro_ggor_1693, retro_ggor_854,
Macropus eugenii ENSMEUG00000010164 ortholog_one2one 1 retrogene
retro_meug_2079,
Myotis lucifugus ENSMLUG00000025583 possible_ortholog 1 retrogene
retro_mluc_761,
Mus musculus ENSMUSG00000020485 ortholog_one2one 2 retrogenes
retro_mmus_2857, retro_mmus_633,
Nomascus leucogenys ENSNLEG00000008159 ortholog_one2one 3 retrogenes
retro_nleu_1619, retro_nleu_1962, retro_nleu_2714,
Oryctolagus cuniculus ENSOCUG00000025823 ortholog_one2one 2 retrogenes
retro_ocun_1613, retro_ocun_1636,
Pongo abelii ENSPPYG00000008233 ortholog_one2one 1 retrogene
retro_pabe_1940,
Pan troglodytes ENSPTRG00000009451 ortholog_one2one 2 retrogenes
retro_ptro_1614, retro_ptro_735,
Pteropus vampyrus ENSPVAG00000002320 ortholog_one2one 1 retrogene
retro_pvam_477,
Rattus norvegicus ENSRNOG00000007845 ortholog_one2one 3 retrogenes
retro_rnor_1255, retro_rnor_1973, retro_rnor_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_842 87.23 80.34
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2. retro_mmul_1005 85.47 100.00
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Download FASTA sequences of all ENSMMUG00000007579 retrocopies