Parental gene:

ENSOCUG00000017371

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:39724452..39727814(+)


>ENSOCUG00000017371
ATGTGCGACTTCACCGAGGACCAGACGGCAGAGTTCAAGGAGGCCTTCCAGCTGTTTGACCGGACAGGCGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGACGTGATGAGGGCCCTGGGCCAGAACCCCACCAACGCCGAGGTGCTCAAGGTCCTGGGGA
ACCCCAAGAGTGACGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTCCTGCCCATGCTGCAGACTGTGGCCAAGAAC
AAGGACCAGGGAACCTATGAGGATTACGTTGAAGGCCTTCGGGTGTTTGACAAGGAAGGGAACGGCACTGTCATGGGTGC
TGAGATCCGCCATGTCCTTGTCACACTGGGTGAGAAGATGACAGAGGAGGAAGTAGAGATGCTGGTGGCAGGGCACGAGG
ACAGCAATGGTTGTATCAACTACGAAGCGTTTGTGAGGCATATCCTGTCGGGGTGA

Library Parental gene expression (RPM)
SRP017611_liver 68 .75 RPM
SRP017611_kidney 393 .97 RPM
SRP017611_brain 231 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000092841 possible_ortholog 2 retrogenes
retro_hsap_1786, retro_hsap_2533,
Macropus eugenii ENSMEUG00000001272 ortholog_one2many 1 retrogene
retro_meug_2172,
Macaca mulatta ENSMMUG00000031838 possible_ortholog 6 retrogenes
retro_mmul_1633, retro_mmul_1663, retro_mmul_211, retro_mmul_2221, retro_mmul_2410, retro_mmul_96,
Mus musculus ENSMUSG00000090841 possible_ortholog 7 retrogenes
retro_mmus_1281, retro_mmus_1504, retro_mmus_2328, retro_mmus_3231, retro_mmus_3333, retro_mmus_3358, retro_mmus_434,
Nomascus leucogenys ENSNLEG00000000205 possible_ortholog 2 retrogenes
retro_nleu_2736, retro_nleu_779,
Oryctolagus cuniculus ENSOCUG00000017368 within_species_paralog 1 retrogene
retro_ocun_374,
Otolemur garnettii ENSOGAG00000034596 possible_ortholog 1 retrogene
retro_ogar_2549,
Pongo abelii ENSPPYG00000004647 possible_ortholog 3 retrogenes
retro_pabe_1467, retro_pabe_1864, retro_pabe_538,
Pan troglodytes ENSPTRG00000005080 possible_ortholog 2 retrogenes
retro_ptro_1196, retro_ptro_1476,
Sarcophilus harrisii ENSSHAG00000004472 ortholog_one2many 6 retrogenes
retro_shar_137, retro_shar_318, retro_shar_452, retro_shar_510, retro_shar_719, retro_shar_765,
Sus scrofa ENSSSCG00000025467 possible_ortholog 1 retrogene
retro_sscr_829,
Ictidomys tridecemlineatus ENSSTOG00000023318 possible_ortholog 1 retrogene
retro_itri_1478,
Tupaia belangeri ENSTBEG00000000485 ortholog_one2one 8 retrogenes
retro_tbel_130, retro_tbel_1715, retro_tbel_2980, retro_tbel_332, retro_tbel_3515, retro_tbel_3545, retro_tbel_3707, retro_tbel_4075,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1300 78.15 100.00
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Download FASTA sequences of all ENSOCUG00000017371 retrocopies