Parental gene: | Myl6, ENSMUSG00000090841 |
| Aliases: | Myl6, ESMLC, LC17, LC17-GI, LC17-NM, LC17A, LC17B, MLC-3, MLC1SM, MLC3SM, MLC3nm, Myln |
| Description: | myosin, light polypeptide 6, alkali, smooth muscle and non-muscle [Source:MGI Symbol;Acc:MGI:109318] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 10:128490859..128493875(-) |
>ENSMUSG00000090841
ATGTGTGACTTCACCGAGGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCTGTTTGACCGAACAGGTGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGATGTGATGCGGGCCCTGGGCCAGAACCCTACCAACGCCGAGGTGCTCAAGGTCCTAGGGA
ACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTCCTGCCCATGCTGCAGACCGTGGCCAAGAAC
AAGGACCAGGGAACCTACGAGGATTATGTTGAAGGCCTTCGTGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGC
TGAAATCCGTCATGTCCTAGTCACACTGGGCGAGAAGATGACAGAGGAAGAAGTAGAGATGCTAGTGGCGGGGCATGAGG
ACAGCAATGGTTGCATCAACTATGAAGAGCTTGTCCGGATGGTGCTGAATGGCTGA
ATGTGTGACTTCACCGAGGACCAGACCGCAGAATTCAAGGAGGCTTTCCAGCTGTTTGACCGAACAGGTGATGGCAAGAT
CCTGTACAGCCAGTGTGGGGATGTGATGCGGGCCCTGGGCCAGAACCCTACCAACGCCGAGGTGCTCAAGGTCCTAGGGA
ACCCCAAGAGTGATGAGATGAATGTGAAGGTGCTGGACTTTGAGCACTTCCTGCCCATGCTGCAGACCGTGGCCAAGAAC
AAGGACCAGGGAACCTACGAGGATTATGTTGAAGGCCTTCGTGTGTTTGACAAGGAAGGAAATGGCACCGTCATGGGTGC
TGAAATCCGTCATGTCCTAGTCACACTGGGCGAGAAGATGACAGAGGAAGAAGTAGAGATGCTAGTGGCGGGGCATGAGG
ACAGCAATGGTTGCATCAACTATGAAGAGCTTGTCCGGATGGTGCTGAATGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 86 .35 RPM |
| SRP007412_cerebellum | 88 .75 RPM |
| SRP007412_heart | 73 .25 RPM |
| SRP007412_kidney | 113 .42 RPM |
| SRP007412_liver | 60 .32 RPM |
| SRP007412_testis | 23 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000001272 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031838 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000061816 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000205 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017371 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034596 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004647 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004472 | ortholog_one2one | 6 retrogenes | |
| Sus scrofa | ENSSSCG00000025467 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000023318 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_434 | 95.71 | 92.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1281 | 95.36 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1504 | 68.18 | 98.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2328 | 95.17 | 96.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_3231 | 98.00 | 99.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_3333 | 98.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_3358 | 57.69 | 83.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000090841 retrocopies