Parental gene:

Eif4b, ENSMUSG00000058655

Aliases:Eif4b, 2310046H11Rik, AL024095, C85189, Eif4a2
Description:eukaryotic translation initiation factor 4B [Source:MGI Symbol;Acc:MGI:95304]
Organism:Mouse (Mus musculus)
Coordinates:15:102073772..102097172(+)


>ENSMUSG00000058655
ATGGCGGCCTCAGCAAAAAAGAAGAATAAGAAGGGGAAGACCATCTCCCTAACGGACTTTCTAGCTGAGGATGGAGGAAC
TGGTGGAGGAAGCACCTATGTCCCCAAACCAGTCAGCTGGGCTGATGAAACAGACGATCTGGAAGGAGATGTGTCAACAA
CTTGGCATAGTAACGATGATGACGTGTACAGGGCGCCTCCAATTGACCGTTCCATCCTTCCCACTGCTCCACGGGCTGCT
CGGGAACCCAATATTGACCGGAGCCGTCTTCCCAAGTCGCCACCCTACACTGCTTTCCTAGGGAATCTGCCCTATGATGT
GACAGAAGACTCCATTAAGGATTTCTTTAGAGGATTAAATATCAGCGCTGTACGCTTACCACGGGAACCCAGCAATCCAG
ACAGGTTGAAAGGTTTCGGCTACGCAGAATTTGAGGACCTGGATTCTCTGCTCAGTGCTCTGAGTCTCAATGAAGAGTCT
CTAGGTAACAGGAGAATTCGTGTGGATGTTGCTGATCAAGCACAGGATAAAGACAGGGATGACCGTTCTTTTGGTCGAGA
TAGAAATCGGGATTCTGACAAAACAGACACAGACTGGAGGGCCCGTCCCACCACAGACAGTTTTGATGACTACCCACCTA
GAAGAGGCGATGATAGCTTTGGAGACAAGTATCGAGATCGTTACGATTCAGACCGGTATCGGGATGGGTATAGGGACGGA
TATCGGGACGGCCCACGCAGAGACATGGACCGCTATGGGGGCCGGGATCGCTATGATGACCGAGGCAGCAGAGACTATGA
CCGAGGCTATGACTCCAGGATAGGCAGTGGCAGAAGGGCATTTGGAAGTGGGTACCGGAGAGATGATGACTACAGAGGAG
GTGGGGACCGCTATGAAGACCGCTATGACAGACGGGATGATCGGTCGTGGAGCTCCAGGGATGACTACTCTCGGGATGAT
TATAGGCGTGATGACAGAGGTCCCCCCCAGAGACCCAGACTGAACCTCAAGCCTCGAAGCGCTCCTAAGGAGGATGACGC
CTCCGCCAGCACCTCCCAGTCCAGCCGGGCAGCCTCCATCTTTGGAGGGGCGAAGCCTGTTGACACAGCTGCTAGGGAAA
GAGAAGTAGAGGAGCGGCTACAGAAGGAGCAGGAGAAGCTGCAGCGTCAGCTGGATGAGCCAAAACTAGACCGCCGGCCC
CGGGAGAGACACCCAAGCTGGCGAAGTGAAGAAACTCAGGAAAGAGAACGGTCAAGGACAGGAAGTGAGTCATCGCAGAC
TGGGGCCTCAGCCACATCTGGCAGAAATACACGAAGGAGAGAGAGTGAGAAGTCTCTAGAAAATGAAACCCTCAATAAAG
AAGAAGACTGTCACTCTCCAACCTCTAAGCCTCCTAAACCTGACCAGCCTCTAAAGGTAATGCCAGCCCCTCCACCAAAG
GAGAATGCGTGGGTGAAGCGAAGCTCTAACCCTCCTGCCCGATCTCAGAGCTCAGACACAGAGCAGCCGTCCCCTACAAG
TGGTGGAGGGAAAGTAGCTGCAGTCCAGCCCCCTGAGGAAGGACCATCAAGAAAAGATGGAAATAAAGTGGATGTGGTGG
GTGCCACACAAGGCCAAGCTGGAAGCTGCAGCCGTGGTCCCGGGGATGGAGGGAGCAGAGACCACTGGAAGGACTTGGAT
AGGAAGGATGGCAAAAAAGATCAAGACTCCAGATCTGCGCCTGAGCCAAAGAAACCTGAGGAGAACCCAGCCTCTAAGTT
CAGCTCTGCAAGCAAGTACGCTGCTCTGTCTGTGGATGGCGAGGATGAGGATGAGGGCGACGACTGCACTGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 165 .60 RPM
SRP007412_cerebellum 193 .66 RPM
SRP007412_heart 211 .19 RPM
SRP007412_kidney 349 .79 RPM
SRP007412_liver 287 .97 RPM
SRP007412_testis 180 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012023 ortholog_one2one 2 retrogenes
retro_amel_1107, retro_amel_559,
Canis familiaris ENSCAFG00000007117 ortholog_one2one 2 retrogenes
retro_cfam_1447, retro_cfam_936,
Choloepus hoffmanni ENSCHOG00000001608 ortholog_one2one 2 retrogenes
retro_chof_1310, retro_chof_366,
Callithrix jacchus ENSCJAG00000018176 ortholog_one2one 2 retrogenes
retro_cjac_1717, retro_cjac_2001,
Cavia porcellus ENSCPOG00000005595 ortholog_one2many 3 retrogenes
retro_cpor_278, retro_cpor_752, retro_cpor_937,
Homo sapiens ENSG00000063046 ortholog_one2one 7 retrogenes
retro_hsap_1686, retro_hsap_2639, retro_hsap_2698, retro_hsap_3767, retro_hsap_4196, retro_hsap_4848, retro_hsap_4891,
Gorilla gorilla ENSGGOG00000013695 ortholog_one2many 5 retrogenes
retro_ggor_1233, retro_ggor_1263, retro_ggor_1882, retro_ggor_1883, retro_ggor_3024,
Loxodonta africana ENSLAFG00000009534 ortholog_one2many 1 retrogene
retro_lafr_294,
Macropus eugenii ENSMEUG00000012341 ortholog_one2one 2 retrogenes
retro_meug_1054, retro_meug_585,
Macaca mulatta ENSMMUG00000001062 ortholog_one2many 5 retrogenes
retro_mmul_1428, retro_mmul_2384, retro_mmul_2589, retro_mmul_731, retro_mmul_783,
Mus musculus ENSMUSG00000040731 within_species_paralog 1 retrogene
retro_mmus_3659,
Nomascus leucogenys ENSNLEG00000017727 ortholog_one2one 3 retrogenes
retro_nleu_2371, retro_nleu_2601, retro_nleu_721,
Pongo abelii ENSPPYG00000025848 ortholog_one2one 7 retrogenes
retro_pabe_1388, retro_pabe_1560, retro_pabe_2283, retro_pabe_260, retro_pabe_3532, retro_pabe_3768, retro_pabe_506,
Rattus norvegicus ENSRNOG00000010103 ortholog_one2many 2 retrogenes
retro_rnor_2467, retro_rnor_2972,
Ictidomys tridecemlineatus ENSSTOG00000006800 ortholog_one2one 1 retrogene
retro_itri_604,
Tupaia belangeri ENSTBEG00000005423 ortholog_one2one 2 retrogenes
retro_tbel_2363, retro_tbel_4167,
Tarsius syrichta ENSTSYG00000012880 ortholog_one2one 1 retrogene
retro_tsyr_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3686 86.39 95.91
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Download FASTA sequences of all ENSMUSG00000058655 retrocopies