Parental gene: | Gabarapl2, ENSMUSG00000031950 |
| Aliases: | None |
| Description: | gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 [Source:MGI Symbol;Acc:MGI:1890602] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:111940702..111953612(+) |
>ENSMUSG00000031950
ATGAAGTGGATGTTTAAGGAGGACCACTCTCTGGAACACAGATGCGTGGAATCCGCGAAGATCAGAGCGAAGTACCCCGA
CCGAGTTCCGGTGATCGTGGAAAAAGTCTCGGGCTCTCAGATTGTTGACATAGACAAGAGGAAGTACTTGGTCCCCTCGG
ACATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCCTCCGAGAAGGCCATCTTCCTGTTTGTG
GACAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGT
GGCCTACAGCGGAGAGAACACTTTTGGCTTCTGA
ATGAAGTGGATGTTTAAGGAGGACCACTCTCTGGAACACAGATGCGTGGAATCCGCGAAGATCAGAGCGAAGTACCCCGA
CCGAGTTCCGGTGATCGTGGAAAAAGTCTCGGGCTCTCAGATTGTTGACATAGACAAGAGGAAGTACTTGGTCCCCTCGG
ACATCACTGTGGCTCAGTTCATGTGGATCATCAGGAAAAGGATCCAGCTTCCCTCCGAGAAGGCCATCTTCCTGTTTGTG
GACAAGACAGTCCCACAGTCCAGCCTAACTATGGGACAGCTTTACGAGAAGGAAAAAGATGAAGATGGATTCTTGTATGT
GGCCTACAGCGGAGAGAACACTTTTGGCTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 29 .88 RPM |
| SRP007412_cerebellum | 32 .09 RPM |
| SRP007412_heart | 11 .49 RPM |
| SRP007412_kidney | 17 .94 RPM |
| SRP007412_liver | 9 .99 RPM |
| SRP007412_testis | 5 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005453 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000031455 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000014253 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000002240 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011981 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009894 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018567 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000031812 | within_species_paralog | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019425 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_456 | 96.58 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_506 | 85.00 | 83.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_2637 | 99.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_2655 | 96.61 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_3240 | 85.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000031950 retrocopies