Parental gene:

Ipo5, ENSMUSG00000030662

Aliases:Ipo5, 1110011C18Rik, 5730478E03Rik, AA409333, C76941, IMB3, Kpnb3, Ranbp5
Description:importin 5 [Source:MGI Symbol;Acc:MGI:1917822]
Organism:Mouse (Mus musculus)
Coordinates:14:120911193..120948042(+)


>ENSMUSG00000030662
ATGGCGGCGGCCGCGGCGGAGCAGCAACAGTTCTACCTGCTCCTGGGAAACCTGCTCAGCCCCGACAATGTGGTCCGGAA
ACAGGCGGAGGAAACCTATGAGAATATCCCAGGCCGGTCCAAGATCACATTCCTCTTACAAGCCATCAGAAACACAACCG
CTGCCGAGGAGGCTAGACAAATGGCTGCTGTTCTCCTAAGACGTCTTTTGTCCTCTGCATTTGATGAAGTCTACCCAGCT
CTTCCATCAGATGTCCAGACTGCCATCAAGAGTGAATTGCTAATGATCATTCAGATGGAAACACAATCCAGCATGAGGAA
GAAAATCTGTGATATTGCTGCAGAATTGGCCAGGAATTTAATAGATGAGGACGGCAACAACCAGTGGCCTGAAGGTTTGA
AGTTCCTCTTTGATTCAGTCAGCTCACAAAACATGGGACTCCGGGAAGCTGCCCTTCACATATTTTGGAACTTTCCTGGA
ATTTTTGGGAACCAACAACAGCACTATTTGGACGTCATCAAACGGATGTTAGTTCAGTGTATGCAAGATCAGGAGCATCC
TTCGATCAGGACACTGTCTGCCAGAGCTACTGCTGCCTTCATACTTGCCAATGAGCATAATGTCGCTCTGTTCAAACACT
TTGCAGACTTGCTGCCTGGATTCTTACAGGCTGTCAATGACTCATGCTACCAGAATGATGACTCGGTCCTAAAATCCCTT
GTTGAGATTGCAGACACCGTACCAAAGTACTTGCGCCCTCACTTAGAAGCAACTCTGCAGTTGAGTCTGAAGTTGTGTGG
AGACACTAACCTCAATAATATGCAGCGCCAGCTTGCCCTTGAAGTGATTGTGACACTGTCAGAGACTGCAGCTGCTATGT
TAAGAAAGCATACCAGTCTCATCGCACAGACGATTCCTCAGATGTTGGCAATGATGGTTGACCTAGAAGAAGATGAGGAC
TGGGCAAATGCTGATGAGCTAGAAGATGATGATTTCGATAGCAATGCAGTTGCTGGTGAGAGTGCATTAGACCGAATGGC
CTGTGGACTTGGTGGAAAGCTCGTTCTGCCCATGATTAAGGAACACATTATGCAAATGCTTCAAAACCCTGATTGGAAAT
ACAGGCATGCAGGACTGATGGCCCTATCCGCCATTGGCGAAGGATGCCACCAGCAGATGGAAGGAATTCTAAATGAGATT
GTAAATTTTGTCTTGCTTTTCCTCCAGGATCCTCATCCGAGAGTCCGGTATGCAGCCTGCAATGCTGTGGGTCAAATGGC
TACAGATTTTGCACCTGGTTTTCAAAAGAAATTTCATGAGAAGGTGATTGCAGCTTTGCTTCAGACCATGGAAGACCAAG
GCAACCAGCGGGTGCAGGCCCATGCAGCGGCTGCCCTCATTAACTTCACTGAAGATTGTCCCAAGTCGCTGCTTATTCCC
TACTTGGATAACTTGGTGAAGCACCTGCACTCCATTATGGTGCTCAAGCTCCAGGAGCTGATTCAGAAAGGCACCAAGTT
AGTTTTGGAACAAGTTGTGACATCCATTGCATCAGTTGCAGATACTGCAGAAGAAAAGTTTGTCCCCTACTATGACTTGT
TTATGCCATCACTGAAGCACATTGTCGAGAACGCAGTCCAGAAGGAGCTGAGACTGCTGCGAGGGAAGACCATCGAGTGC
ATCAGCCTCATCGGGCTGGCCGTCGGGAAGGAGAAATTCATGCAGGATGCTTCAGATGTGATGCAGCTATTGTTGAAGAC
ACAGACAGACTTCAATGATATGGAAGATGACGACCCCCAGATTTCTTACATGATCTCAGCATGGGCCAGGATGTGCAAAA
TCCTTGGGAAAGAATTCCAGCAGTACCTTCCCGTGGTTATGGGGCCGCTGATGAAGACTGCTTCAATTAAGCCTGAAGTG
GCCCTTCTAGACACCCAGGACATGGAGAATATGAGTGATGATGACGGTTGGGAATTTGTGAACCTCGGAGATCAGCAAAG
TTTTGGTATTAAAACTGCAGGACTGGAAGAAAAGTCAACGGCTTGTCAGATGTTGGTTTGCTATGCTAAGGAATTAAAGG
AAGGTTTTGTGGAATACACTGAACAGGTTGTCAAACTGATGGTCCCGCTGCTGAAATTTTATTTCCACGATGGGGTCCGA
GTGGCAGCAGCAGAGTCCATGCCTCTTCTGCTTGAGTGTGCGAGAGTCCGGGGTCCCGAGTACCTTACACAGATGTGGCA
CTTCATGTGCGACGCTCTCATCAAGGCCATCGGCACAGAGCCCGACTCAGATGTCCTCTCGGAGATCATGCATTCCTTTG
CAAAGTGCATTGAGGTCATGGGAGACGGGTGCCTCAACAATGAGCACTTTGAGGAGCTGGGAGGCATCCTGAAGGCGAAG
CTTGAAGAACATTTCAAAAATCAGGAGTTGCGGCAAGTTAAAAGACAAGATGAAGACTATGACGAGCAGGTTGAAGAGTC
ACTACAAGATGAGGATGATAATGATGTTTATATACTGACTAAAGTGTCGGATATTTTACACTCAATATTCAGTAGCTACA
AAGAAAAGGTGTTGCCGTGGTTTGAACAGCTGCTCCCATTAATTGTCAACCTGATTTGTCCGCAAAGACCATGGCCAGAC
AGACAATGGGGATTGTGCATCTTCGATGATATCGTAGAACACTGTAGTCCAGCTTCATTTAAGTATGCAGAATATTTCAT
AAGTCCAATGCTCCAGTATGTGTGTGACAACAGCCCAGAAGTCAGGCAAGCTGCGGCATATGGCCTCGGCGTCATGGCGC
AGTTTGGTGGAGATAACTACCGCCCTTTCTGTACCGATGCACTCCCGCTGCTTGTAAGAGTCATTCAGGCTCCAGAGGCT
AAGACCAAAGAAAATGTCAACGCCACGGAGAACTGCATCTCAGCAGTGGGAAAGATCATGAAGTTCAAGCCCGACTGTGT
GAATGTGGAGGAGGTCTTACCACACTGGCTGTCATGGCTGCCCCTACACGAAGATAAAGAAGAAGCTGTCCAGACCTTCA
GTTACCTGTGCGACCTGATTGAAAGTAATCACCCAATTGTTCTTGGCCCAAACAATACCAATCTACCGAAAATATTCAGT
ATAATTGCAGAAGGAGAAATGCATGAGGCCATTAAACATGAAGACCCCTGTGCCAAACGCCTGGCCAATGTAGTTCGCCA
AGTACAGACTTCTGGAGGATTGTGGACTGAATGCATAGCTCAACTCAGTCCGGAGCAGCAGGCAGCCATCCAGGAGCTCC
TGAACTCTGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 164 .99 RPM
SRP007412_cerebellum 119 .06 RPM
SRP007412_heart 209 .91 RPM
SRP007412_kidney 124 .58 RPM
SRP007412_liver 73 .05 RPM
SRP007412_testis 1253 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003784 ortholog_one2one 1 retrogene
retro_amel_3,
Bos taurus ENSBTAG00000039374 ortholog_one2one 1 retrogene
retro_btau_104,
Canis familiaris ENSCAFG00000005561 ortholog_one2one 1 retrogene
retro_cfam_452,
Choloepus hoffmanni ENSCHOG00000006061 ortholog_one2many 1 retrogene
retro_chof_11,
Cavia porcellus ENSCPOG00000004827 ortholog_one2one 2 retrogenes
retro_cpor_265, retro_cpor_57,
Equus caballus ENSECAG00000014808 ortholog_one2one 1 retrogene
retro_ecab_37,
Felis catus ENSFCAG00000025657 ortholog_one2one 1 retrogene
retro_fcat_24,
Homo sapiens ENSG00000065150 ortholog_one2one 1 retrogene
retro_hsap_57,
Gorilla gorilla ENSGGOG00000008742 ortholog_one2one 1 retrogene
retro_ggor_47,
Loxodonta africana ENSLAFG00000016190 ortholog_one2one 1 retrogene
retro_lafr_22,
Myotis lucifugus ENSMLUG00000006500 ortholog_one2one 1 retrogene
retro_mluc_295,
Nomascus leucogenys ENSNLEG00000007831 ortholog_one2one 2 retrogenes
retro_nleu_1610, retro_nleu_2482,
Oryctolagus cuniculus ENSOCUG00000003898 ortholog_one2one 1 retrogene
retro_ocun_143,
Otolemur garnettii ENSOGAG00000007570 ortholog_one2one 1 retrogene
retro_ogar_169,
Pongo abelii ENSPPYG00000005458 ortholog_one2one 1 retrogene
retro_pabe_172,
Pan troglodytes ENSPTRG00000005984 ortholog_one2one 2 retrogenes
retro_ptro_49, retro_ptro_745,
Pteropus vampyrus ENSPVAG00000004516 ortholog_one2one 1 retrogene
retro_pvam_8,
Rattus norvegicus ENSRNOG00000010989 ortholog_one2one 1 retrogene
retro_rnor_240,
Sus scrofa ENSSSCG00000009509 ortholog_one2one 1 retrogene
retro_sscr_24,
Ictidomys tridecemlineatus ENSSTOG00000011164 ortholog_one2one 1 retrogene
retro_itri_32,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_251 77.58 100.00
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2. retro_mmus_3683 88.65 83.14
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Download FASTA sequences of all ENSMUSG00000030662 retrocopies