Parental gene:

Tmed10, ENSMUSG00000021248

Aliases:Tmed10, 1110014C03Rik, Tmp21, p23, p24delta1
Description:transmembrane emp24-like trafficking protein 10 (yeast) [Source:MGI Symbol;Acc:MGI:1915831]
Organism:Mouse (Mus musculus)
Coordinates:12:85340613..85374717(-)


>ENSMUSG00000021248
ATGTCTGGTTTGTTTGGCCCACTCTCCCGGCCTGGCCCTCTCCCGTCCGCCTGGCTCTTTCTGTTGCTGCTCGGCCCCAG
CTCGGTCCTCGGCATCTCCTTCCATCTGCCCGTGAACTCTCGCAAGTGTCTCCGAGAGGAGATCCACAAGGACCTGCTGG
TGACGGGCGCCTACGAGATCACCGACCAGTCTGGGGGCGCTGGCGGCCTGCGCACCCACCTCAAGATCACAGATTCTGCT
GGCCATATTCTGTATGCCAAAGAGGATGCAACCAAGGGGAAGTTTGCCTTTACCACGGAAGACTATGACATGTTTGAAGT
GTGTTTTGAGAGCAAGGGAACAGGGCGGATACCTGACCAACTCGTGATTCTAGACATGAAGCATGGAGTAGAGGCGAAAA
ATTATGAAGAGATTGCAAAAGTCGAGAAACTCAAACCACTGGAGGTGGAGTTACGACGGCTCGAGGACCTTTCCGAGTCC
ATTGTTAATGACTTTGCCTACATGAAGAAGCGGGAAGAGGAGATGAGGGACACTAATGAGTCCACGAACACCCGGGTCCT
GTACTTCAGCATCTTTTCCATGTTCTGCCTCATTGGACTAGCCACCTGGCAGGTCTTCTACCTGCGTCGCTTCTTCAAGG
CCAAGAAGTTGATAGAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 94 .50 RPM
SRP007412_cerebellum 76 .29 RPM
SRP007412_heart 89 .47 RPM
SRP007412_kidney 83 .31 RPM
SRP007412_liver 76 .55 RPM
SRP007412_testis 49 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000016899 ortholog_one2one 1 retrogene
retro_acar_187,
Callithrix jacchus ENSCJAG00000020627 ortholog_one2one 2 retrogenes
retro_cjac_1409, retro_cjac_4223,
Dasypus novemcinctus ENSDNOG00000019851 ortholog_one2one 1 retrogene
retro_dnov_1225,
Echinops telfairi ENSETEG00000010607 possible_ortholog 1 retrogene
retro_etel_1798,
Homo sapiens ENSG00000170348 ortholog_one2one 2 retrogenes
retro_hsap_2701, retro_hsap_4014,
Gorilla gorilla ENSGGOG00000007453 ortholog_one2one 1 retrogene
retro_ggor_2696,
Myotis lucifugus ENSMLUG00000017125 ortholog_one2many 2 retrogenes
retro_mluc_2079, retro_mluc_2093,
Macaca mulatta ENSMMUG00000015168 ortholog_one2one 2 retrogenes
retro_mmul_2316, retro_mmul_885,
Nomascus leucogenys ENSNLEG00000016453 ortholog_one2one 2 retrogenes
retro_nleu_2897, retro_nleu_2963,
Oryctolagus cuniculus ENSOCUG00000004669 ortholog_one2one 1 retrogene
retro_ocun_875,
Pongo abelii ENSPPYG00000029389 ortholog_one2one 1 retrogene
retro_pabe_3296,
Pan troglodytes ENSPTRG00000006552 ortholog_one2one 2 retrogenes
retro_ptro_1823, retro_ptro_2724,
Rattus norvegicus ENSRNOG00000007901 ortholog_one2one 2 retrogenes
retro_rnor_1729, retro_rnor_2031,
Ictidomys tridecemlineatus ENSSTOG00000007392 ortholog_one2one 1 retrogene
retro_itri_362,
Vicugna pacos ENSVPAG00000003089 ortholog_one2one 1 retrogene
retro_vpac_573,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_649 56.36 100.00
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2. retro_mmus_1093 99.09 100.00
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Download FASTA sequences of all ENSMUSG00000021248 retrocopies