Parental gene: | Ddx21, ENSMUSG00000020075 |
| Aliases: | Ddx21, AI255159, AL022742, D10Ertd645e, D10Wsu42e |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Source:MGI Symbol;Acc:MGI:1860494] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 10:62580247..62602298(-) |
>ENSMUSG00000020075
ATGCCGGGAAAACTCCGCAGTGGGGCCAAGTTGGGCTCAGACGGGGCCGAGGAGAGCATGGAGACGCTGCCGAAGCCAAG
CGAGAAGAAAACTAGAAAAGAGAAGACAAAATCAAAGACCGAAGAAGCAACAGAAGGAATGGAAGAGGCCGTTTCCTCCA
AAGCAAAGAAAACAAACAAGAAAGGGCCTTCTGAGGATGATGTGGATCCCCCTAAATCCAGGAAGGCCAAGAAGCAGGAG
GAGGAGCCTCAAGACGACACTGCTTCTACAAGCAAAACCTCCAAGAAGAAAAAGGAGCCCCTTGAGAAGCAAGCAGACTC
TGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGCAGACATGCCTAAGCCCAAGAAGATGAAGAAAGGGA
AAGAAGCAAACGGAGATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGAC
ATTCCTAAGCCCAAGAAGATGAAGAAAGGGAAAGAAGCAAACGGAGATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGG
ACTCTCCCAACCTTCCGAAGAAGAGGTAGACATTCCTAAGCCCAAGAAGATGAAGAAAGGGAAAGAAGCAAGCGGAGATG
CGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCTGGT
GAGGAAAGTAGTAGCGAGACAGAAAAGGAAATACCTGTGGAGCAGAAAGAGGGAGCTTTCTCTAATTTTCCCATTTCTGA
AGAGACTGTCAAGCTTCTCAAAGCTCGTGGGGTGAACTTCCTGTTTCCTATACAAGCCAAGACCTTTCATCATGTGTACA
GTGGGAAAGACTTAATTGCCCAGGCACGGACAGGAACCGGAAAGACATTCTCTTTTGCCATCCCTTTAATTGAGAAACTT
CAAGGTGGGCTACAAGAGAGGAAGAGAGGCCGAGCCCCTCAGGTGCTAGTCCTTGCACCCACAAGAGAATTAGCAAATCA
AGTGAGCAAAGACTTCAGCGACATCACCAAAAAGCTCTCTGTAGCTTGTTTTTATGGTGGAACACCCTACGGTGGTCAGA
TTGAACGAATGCGGAGTGGGATTGATATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTA
GATCTCACCAAACTTAAACATGTTGTCCTGGATGAAGTCGACCAGATGTTGGATATGGGTTTTGCTGATCAAGTGGAAGA
AATTTTATGTGTTGCATACAAGAAAGATTCTGAAGACAACCCCCAAACATTGCTTTTCTCTGCAACTTGCCCTCATTGGG
TGTTTAATGTTGCTAAGAAATACATGAAATCTACATACGAACAGGTGGACCTGATTGGTAAAAAGACTCAGAAAGCAGCT
ATAACTGTGGAGCACCTGGCGATTAAGTGTCACTGGACAGAAAGGGCAGCGGTGATTGGGGATGTGATCCGAGTGTACAG
TGGTCATCAAGGGCGCACGATCATCTTCTGTGAAACCAAGAAGGATGCCCAGGAGCTATCTCAGAACACGTGCATAAAGC
AGGATGCCCAGTCCTTACATGGCGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCCGAAATGGCAATTTT
GGAGTTTTGGTGGCAACCAATGTTGCTGCCCGTGGGTTAGACATCCCTGAGGTTGACTTGGTTGTTCAGAGCTGCCCACC
AAAGGATGTGGAGTCTTACATTCATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAGGAGTTTGCATCTGCTTTTACC
AGAACAAAGAAGAGTACCAGTTAGCACAAGTGGAGCAGAAAGCGGGAATTAAATTTAAACGGATAGGTGTTCCTTCTGCA
ACGGAAATAATAAAAGCCTCCAGCAAAGACGCCATCAGGCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAA
GCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAGGCCTTGGCAGCTGCTCTGGCCCACATCTCAGGAGCCA
CATCAGTCGATCAGCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGACCATGATCCTGCGGTGCTCCATTGAGATGCCC
AACATCAGTTACGCTTGGAAAGAACTTAAGGAGCAGCTGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGTCTTCCT
CAAAGGAAAACTGGGGGTTTGTTTTGATGTCCGAACTGAAGCAGTCACAGAAATACAGGAGAAGTGGCATGATTCGAGAC
GCTGGCAGCTCACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGGCCGCATGGGTCAGCGT
GATGGCAGCCGTGGTGCTTTCAGAGGACAGCGGGGTGGAAGCAGGAACTTCCGGGGACAGGGACAGCGAGGAGGAAGTAG
AAACTTCCGAGGACAGCGACCAGGAGGTGGCAACAGAGGCCAGAAGCGGAGTTTTAGTAAAGCGTTTGGTCAGTGA
ATGCCGGGAAAACTCCGCAGTGGGGCCAAGTTGGGCTCAGACGGGGCCGAGGAGAGCATGGAGACGCTGCCGAAGCCAAG
CGAGAAGAAAACTAGAAAAGAGAAGACAAAATCAAAGACCGAAGAAGCAACAGAAGGAATGGAAGAGGCCGTTTCCTCCA
AAGCAAAGAAAACAAACAAGAAAGGGCCTTCTGAGGATGATGTGGATCCCCCTAAATCCAGGAAGGCCAAGAAGCAGGAG
GAGGAGCCTCAAGACGACACTGCTTCTACAAGCAAAACCTCCAAGAAGAAAAAGGAGCCCCTTGAGAAGCAAGCAGACTC
TGAAACCAAAGAGATAATAACAGAGGAGCCTTCCGAAGAAGAGGCAGACATGCCTAAGCCCAAGAAGATGAAGAAAGGGA
AAGAAGCAAACGGAGATGCCGGAGAGAAAAGCCCCAAGCTGAAGAATGGACTCTCCCAACCTTCCGAAGAAGAGGCAGAC
ATTCCTAAGCCCAAGAAGATGAAGAAAGGGAAAGAAGCAAACGGAGATGCTGGAGAGAAAAGCCCCAAGCTGAAGAATGG
ACTCTCCCAACCTTCCGAAGAAGAGGTAGACATTCCTAAGCCCAAGAAGATGAAGAAAGGGAAAGAAGCAAGCGGAGATG
CGGGAGAGAAAAGCCCCAGGCTGAAGGATGGACTCTCCCAACCTTCTGAACCGAAATCCAACTCCAGTGATGCTCCTGGT
GAGGAAAGTAGTAGCGAGACAGAAAAGGAAATACCTGTGGAGCAGAAAGAGGGAGCTTTCTCTAATTTTCCCATTTCTGA
AGAGACTGTCAAGCTTCTCAAAGCTCGTGGGGTGAACTTCCTGTTTCCTATACAAGCCAAGACCTTTCATCATGTGTACA
GTGGGAAAGACTTAATTGCCCAGGCACGGACAGGAACCGGAAAGACATTCTCTTTTGCCATCCCTTTAATTGAGAAACTT
CAAGGTGGGCTACAAGAGAGGAAGAGAGGCCGAGCCCCTCAGGTGCTAGTCCTTGCACCCACAAGAGAATTAGCAAATCA
AGTGAGCAAAGACTTCAGCGACATCACCAAAAAGCTCTCTGTAGCTTGTTTTTATGGTGGAACACCCTACGGTGGTCAGA
TTGAACGAATGCGGAGTGGGATTGATATCCTGGTTGGGACCCCAGGTCGTATTAAAGACCACTTGCAGAATGGCAAGCTA
GATCTCACCAAACTTAAACATGTTGTCCTGGATGAAGTCGACCAGATGTTGGATATGGGTTTTGCTGATCAAGTGGAAGA
AATTTTATGTGTTGCATACAAGAAAGATTCTGAAGACAACCCCCAAACATTGCTTTTCTCTGCAACTTGCCCTCATTGGG
TGTTTAATGTTGCTAAGAAATACATGAAATCTACATACGAACAGGTGGACCTGATTGGTAAAAAGACTCAGAAAGCAGCT
ATAACTGTGGAGCACCTGGCGATTAAGTGTCACTGGACAGAAAGGGCAGCGGTGATTGGGGATGTGATCCGAGTGTACAG
TGGTCATCAAGGGCGCACGATCATCTTCTGTGAAACCAAGAAGGATGCCCAGGAGCTATCTCAGAACACGTGCATAAAGC
AGGATGCCCAGTCCTTACATGGCGACATTCCACAGAAGCAAAGGGAAATCACCCTGAAAGGTTTCCGAAATGGCAATTTT
GGAGTTTTGGTGGCAACCAATGTTGCTGCCCGTGGGTTAGACATCCCTGAGGTTGACTTGGTTGTTCAGAGCTGCCCACC
AAAGGATGTGGAGTCTTACATTCATCGTTCGGGGCGGACAGGCAGAGCTGGAAGGACAGGAGTTTGCATCTGCTTTTACC
AGAACAAAGAAGAGTACCAGTTAGCACAAGTGGAGCAGAAAGCGGGAATTAAATTTAAACGGATAGGTGTTCCTTCTGCA
ACGGAAATAATAAAAGCCTCCAGCAAAGACGCCATCAGGCTCTTGGATTCTGTGCCTCCCACTGCCATTAGCCATTTCAA
GCAGTCAGCTGAGAAGCTGATTGAGGAGAAGGGAGCTGTAGAGGCCTTGGCAGCTGCTCTGGCCCACATCTCAGGAGCCA
CATCAGTCGATCAGCGCTCCCTGATCAACTCGCAAGCAGGCTTTGTGACCATGATCCTGCGGTGCTCCATTGAGATGCCC
AACATCAGTTACGCTTGGAAAGAACTTAAGGAGCAGCTGGGCGAGAGCATCGATGCCAAAGTGAAGGGAATGGTCTTCCT
CAAAGGAAAACTGGGGGTTTGTTTTGATGTCCGAACTGAAGCAGTCACAGAAATACAGGAGAAGTGGCATGATTCGAGAC
GCTGGCAGCTCACCGTGGCCACCGAGCAGCCAGAGCTGGAGGGACCTCCAGACGGATATCGAGGCCGCATGGGTCAGCGT
GATGGCAGCCGTGGTGCTTTCAGAGGACAGCGGGGTGGAAGCAGGAACTTCCGGGGACAGGGACAGCGAGGAGGAAGTAG
AAACTTCCGAGGACAGCGACCAGGAGGTGGCAACAGAGGCCAGAAGCGGAGTTTTAGTAAAGCGTTTGGTCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 25 .79 RPM |
| SRP007412_cerebellum | 28 .18 RPM |
| SRP007412_heart | 48 .69 RPM |
| SRP007412_kidney | 57 .17 RPM |
| SRP007412_liver | 54 .86 RPM |
| SRP007412_testis | 79 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000013791 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000012876 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010586 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015112 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020076 | within_species_paralog | 1 retrogene | |
| Mus musculus | ENSMUSG00000020719 | other_paralog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000016697 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002389 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002310 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_582 | 71.78 | 51.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_662 | 70.20 | 68.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000020075 retrocopies