Parental gene: | DDX21, ENSCAFG00000013791 |
| Aliases: | None |
| Description: | DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:HGNC Symbol;Acc:2744] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 4:20109821..20132111(+) |
>ENSCAFG00000013791
ATGCCGGGGAAACTCCTTAGTGACGCGGGTTTGGACTCCGAGACCGCCATGGAAGAAGTGGAGACACCGCGGAAGCAGAA
TGAGAAGAAAGGTAGAAAGGAGAAACCAAAATCTATTAAGACTGAAGAGGCAACAGAAGTAAAAGAAGAAATTCCTTCCC
CTAAAGCTAAAAAAGTTAAAAAGAAAGCTGAGTCTAATGAGGTTGACATGAATTCTCCTAAATCTAAAAAGGCAAAAAAG
AAAGAGGAGCCATCTCAGGATGACATAATTTCTCCTAAAACCAAAAGTGTGAAAAAAACAAAGGAGTCCTTTGAAAAGAA
AGTTGTTTCTCCTAAAACAAAAAAAGTAATAAAAAGTGAAGAACCTTCTGAAGAAGAGATAAGTGCTCCTAAGCCCAAGA
AGATGAAGAAAGAAAAGGAAATGAATGGAGAAATTGGAGAGAAAAGCCCCAAACTGAAGAATGGATTCCCTCATTCTGGA
CTTGTCTCTAACACCAGTGAAACCCTAGGGGAAGAAAGTAGCAGTGAGTTAGAGCAGGAAATACCTGTGGAACAGAAAGA
AGGAGCTTTCTCTAATTTTCCCATATCTGAAGAGACTATTAAACTTCTCAAAGCCCGTGGGGTGACCTTCCTGTTTCCTA
TACAAGCAAAGACATTTTACCATGTCTATAGTGGAAAGGACTTAATTGCACAGGCGCGGACAGGAACTGGGAAGACATTC
TCCTTTGCCATCCCTTTGATTGTGAAGCTCCAGGGAGAACTGCAAGACAGGAAAAGAGGTCGTGCCCCTCAGGTACTGGT
TCTTGCACCCACGAGGGAGTTGGCAAATCAAGTAAGCAGAGACTTCAGTGACATCACAAGAAAGCTGGCGGTGGCTTGTT
TTTATGGTGGAACTCCCTATGGAGGTCAAATTGAACGTATGCGGAATGGGATTGATATCCTGGTTGGGACCCCAGGTCGT
ATCAAAGACCACCTTCAGAATGGCAAGCTAGATCTCACCAAACTTAAGCATGTTGTCTTGGATGAAGTTGACCAGATGTT
AGATATGGGGTTTGCTGATCAAGTGGAAGAGATTTTAAGTGTGGCATACAAAAAAGATTCAGAAGACAATCCCCAAACAT
TGCTTTTTTCTGCAACTTGCCCTCATTGGGTATATAATGTTGCTAAGAAATACATGAAATCTACATATGAACAGGTGGAC
CTGATTGGTAAAAAGACCCAGAAAACGGCAATAACCGTGGAGCACCTGGCTATCAAGTGCCACTGGACTCAAAGGGCAGC
AGTTATTGGGGATGTGATCCGAGTATATAGTGGTTTTCATGGGCGTACCATTATCTTCTGCGAAACCAAGAAAGAAGCCC
AGGAGTTGTCACAGAATGTGTCCATAAGGCAGGATGCCCAGTCATTGCATGGAGATATTCCTCAGAAGCAGAGAGAAATC
ACTCTGAAAGGTTTTAGAAATGGTGATTTTGGAGTTTTGGTTGCAACTAATGTTGCTGCTCGTGGGTTAGACATCCCTGA
GGTTGATCTGGTGATACAGAGTTCTCCACCAAAGGATGTGGAGTCCTATATTCATCGCTCTGGGAGGACGGGCAGAGCTG
GAAGGACAGGGATTTGCATCTGCTTTTATCAGCACAAGGAGGAGTATCAGTTAGCACAAGTGGAGCAAAAAGCGGGAATT
AAATTTAAACGAATAGGTGTCCCATCTGCAACAGAGATCATAAAAGCTTCCAGCAAAGATGCCATCAGGCTTTTGGATTC
TGTGCCTCCCACTGCCATTAGTCATTTCAAGCAGTCAGCGGAGAAACTAATAGAGGAGAAAGGAGCCGTGGAAGCCCTGG
CAGCAGCCTTGGCCCATATTTCAGGTGCCACATCAGTAGACCAGCGCTCTCTGATCAACTCAGATGCGGGCTTTGTGACC
ATGATCTTACGATGCTCAATTGAAATGCCAAACATTAGTTATGCTTGGAAAGAACTTAAAGAGCAGCTGGGAGAGGATAT
TGATTCCAAAGTGAAAGGAATGGTTTTTCTCAAAGGAAAGCAGGGGGTTTGCTTCGACGTCCCTACTGCAGCATTAACAG
AAATACAGCAGGAAAAATGGCATGATTCGCGTCGCTGGCAGCTCTCCGTGGCCACAGAGCAACCAGAGCTGGAAGGACCT
CGGGAAGGATATCGAAACTTCCGTGGACAGCGGGAAGGCAGTCGAGGCTCCCGGGGACAGCGGGAAGGCAGTCGAGGCTT
TAGAGGACAGCGGGAGGGAAATCGAAGCTTCAGAGGACAGCGATCAAGAGGTGGCAACAAAAATAACAGATTCCAAAACA
AAGGCCAGAAGAGGAGTTTCAGTAAAGCATTTGGGCAGTAA
ATGCCGGGGAAACTCCTTAGTGACGCGGGTTTGGACTCCGAGACCGCCATGGAAGAAGTGGAGACACCGCGGAAGCAGAA
TGAGAAGAAAGGTAGAAAGGAGAAACCAAAATCTATTAAGACTGAAGAGGCAACAGAAGTAAAAGAAGAAATTCCTTCCC
CTAAAGCTAAAAAAGTTAAAAAGAAAGCTGAGTCTAATGAGGTTGACATGAATTCTCCTAAATCTAAAAAGGCAAAAAAG
AAAGAGGAGCCATCTCAGGATGACATAATTTCTCCTAAAACCAAAAGTGTGAAAAAAACAAAGGAGTCCTTTGAAAAGAA
AGTTGTTTCTCCTAAAACAAAAAAAGTAATAAAAAGTGAAGAACCTTCTGAAGAAGAGATAAGTGCTCCTAAGCCCAAGA
AGATGAAGAAAGAAAAGGAAATGAATGGAGAAATTGGAGAGAAAAGCCCCAAACTGAAGAATGGATTCCCTCATTCTGGA
CTTGTCTCTAACACCAGTGAAACCCTAGGGGAAGAAAGTAGCAGTGAGTTAGAGCAGGAAATACCTGTGGAACAGAAAGA
AGGAGCTTTCTCTAATTTTCCCATATCTGAAGAGACTATTAAACTTCTCAAAGCCCGTGGGGTGACCTTCCTGTTTCCTA
TACAAGCAAAGACATTTTACCATGTCTATAGTGGAAAGGACTTAATTGCACAGGCGCGGACAGGAACTGGGAAGACATTC
TCCTTTGCCATCCCTTTGATTGTGAAGCTCCAGGGAGAACTGCAAGACAGGAAAAGAGGTCGTGCCCCTCAGGTACTGGT
TCTTGCACCCACGAGGGAGTTGGCAAATCAAGTAAGCAGAGACTTCAGTGACATCACAAGAAAGCTGGCGGTGGCTTGTT
TTTATGGTGGAACTCCCTATGGAGGTCAAATTGAACGTATGCGGAATGGGATTGATATCCTGGTTGGGACCCCAGGTCGT
ATCAAAGACCACCTTCAGAATGGCAAGCTAGATCTCACCAAACTTAAGCATGTTGTCTTGGATGAAGTTGACCAGATGTT
AGATATGGGGTTTGCTGATCAAGTGGAAGAGATTTTAAGTGTGGCATACAAAAAAGATTCAGAAGACAATCCCCAAACAT
TGCTTTTTTCTGCAACTTGCCCTCATTGGGTATATAATGTTGCTAAGAAATACATGAAATCTACATATGAACAGGTGGAC
CTGATTGGTAAAAAGACCCAGAAAACGGCAATAACCGTGGAGCACCTGGCTATCAAGTGCCACTGGACTCAAAGGGCAGC
AGTTATTGGGGATGTGATCCGAGTATATAGTGGTTTTCATGGGCGTACCATTATCTTCTGCGAAACCAAGAAAGAAGCCC
AGGAGTTGTCACAGAATGTGTCCATAAGGCAGGATGCCCAGTCATTGCATGGAGATATTCCTCAGAAGCAGAGAGAAATC
ACTCTGAAAGGTTTTAGAAATGGTGATTTTGGAGTTTTGGTTGCAACTAATGTTGCTGCTCGTGGGTTAGACATCCCTGA
GGTTGATCTGGTGATACAGAGTTCTCCACCAAAGGATGTGGAGTCCTATATTCATCGCTCTGGGAGGACGGGCAGAGCTG
GAAGGACAGGGATTTGCATCTGCTTTTATCAGCACAAGGAGGAGTATCAGTTAGCACAAGTGGAGCAAAAAGCGGGAATT
AAATTTAAACGAATAGGTGTCCCATCTGCAACAGAGATCATAAAAGCTTCCAGCAAAGATGCCATCAGGCTTTTGGATTC
TGTGCCTCCCACTGCCATTAGTCATTTCAAGCAGTCAGCGGAGAAACTAATAGAGGAGAAAGGAGCCGTGGAAGCCCTGG
CAGCAGCCTTGGCCCATATTTCAGGTGCCACATCAGTAGACCAGCGCTCTCTGATCAACTCAGATGCGGGCTTTGTGACC
ATGATCTTACGATGCTCAATTGAAATGCCAAACATTAGTTATGCTTGGAAAGAACTTAAAGAGCAGCTGGGAGAGGATAT
TGATTCCAAAGTGAAAGGAATGGTTTTTCTCAAAGGAAAGCAGGGGGTTTGCTTCGACGTCCCTACTGCAGCATTAACAG
AAATACAGCAGGAAAAATGGCATGATTCGCGTCGCTGGCAGCTCTCCGTGGCCACAGAGCAACCAGAGCTGGAAGGACCT
CGGGAAGGATATCGAAACTTCCGTGGACAGCGGGAAGGCAGTCGAGGCTCCCGGGGACAGCGGGAAGGCAGTCGAGGCTT
TAGAGGACAGCGGGAGGGAAATCGAAGCTTCAGAGGACAGCGATCAAGAGGTGGCAACAAAAATAACAGATTCCAAAACA
AAGGCCAGAAGAGGAGTTTCAGTAAAGCATTTGGGCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .89 RPM |
| SRP017611_kidney | 20 .47 RPM |
| SRP017611_liver | 19 .14 RPM |
| SRP012049_cerebellum | 20 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012876 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010586 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015112 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020075 | ortholog_one2one | 2 retrogenes | |
| Procavia capensis | ENSPCAG00000016697 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002389 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000002310 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1024 | 90.10 | 98.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1925 | 94.73 | 72.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000013791 retrocopies