Parental gene: | EIF3L, ENSMODG00000019068 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 3, subunit L [Source:HGNC Symbol;Acc:18138] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | Un:35956323..35970189(-) |
>ENSMODG00000019068
GCCGCCATGTCCTACCCGTCCGAGGATTACGACAACGAGGCTGCATATGATCCCTATGCTTACCCTGGCGACTATGACAT
GCACACAGGAGACCCAAAGCAGGACCTAGCCTATGAACGACAATATGAGCAGCAGACCTATCAAGTAATTCCAGAAGTGA
TCAAGGATTTCATCCAATATTTCCATAAAACTGTCTCCGACCTTATCGACCAGAAAGTGTATGAGCTCCAGGCAAGCCGG
GTGTCCAGTGACGTTATCGACCAAAAGGTGTATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAG
GTTCTTCAAGAATACCCCCTGGCCAGAAGCAGAGGCCATTGCCCCACAAGTTGGCAACGATGCTGTCTTCTTGATCCTGT
ATAAGGAACTTTATTACAGACACATCTATGCCAAAGTCAGCGGCGGGCCTTCCTTGGAACAGAGGTTTGAGTCCTATTAC
AACTACTGCAACCTTTTCAACTACATTCTCAATGCTGATGGACCTGCCCCCCTTGAACTGCCCAACCAGTGGCTGTGGGA
TATCATTGATGAATTCATCTACCAGTTTCAGTCATTCAGTCAATACCGGTGGAAGACGGCCAAAAAGTCAGATGAGGAGA
TTGACTTTCTTCGTTCCAACCCCAAGGTCTGGAATGTCCACAGCGTCCTCAATGTGCTTCATTCCCTTGTAGACAAATCC
AATATCAACCGGCAGCTAGAAGTCTATACCAGTGGAGGTGACCCTGAGAGTGTGGCTGGTGAGTATGGCCGGCACTCCCT
CTACAAGATGCTTGGCTACTTCAGCCTGGTGGGGCTGCTCCGGCTCCACTCCCTCTTGGGGGATTACTACCAGGCTATCA
AGGTGCTGGAGAACATTGAGTTGAACAAGAAGAGCATGTATTCCCGGGTGCCTGAATGCCAGGTCACCACCTATTACTAT
GTGGGGTTTGCCTACTTGATGATGCGCCGGTACCAGGATGCCATTCGTGTCTTTGCCAACATCCTGCTCTACATTCAGAG
AACCAAGAGCATGTTTCAGAGAACAACGTACAAATATGAGATGATCAACAAGCAGAATGAGCAAATGCATGCCCTGCTGG
CCATTGCCCTGACCATGTACCCCATGCGCATTGATGAGAGCATCCACCTGCAGCTCCGAGAGAAGTATGGAGACAAGATG
CTGCGCATGCAGAAGGGGGACCCCCAGGTATATGAGGAGCTCTTTAGCTACTCCTGCCCCAAGTTCCTGTCCCCCGTTGT
GCCCAACTACGACAACATGCACCCCAACTACCACAAGGAGCCCTTCCTGCAGCAGCTGAAAGTGTTTGCAGATGAGGTAC
AGCAGCAGGCCCAGCTGTCCACCATTCGCAGCTTCCTGAAGCTCTATACCACCATGCCTGTGGCCAAGCTGGCTGGTTTC
TTGGACCTCACTGAACAGGAGTTCCGTATCCAGCTGCTGGTCTTCAAACACAAGATGAAGAACCTGGTGTGGACGAGTGG
CATCTCTGCCCTGGACGGAGAGTTCCAGTCAGCCTCCGAGGTGGACTTCTACATCGACAAAGACATGATCCATATTGCAG
ATACCAAGGTGGCCCGCCGCTATGGAGACTTCTTCATCCGACAAATCCATAAATTTGAGGAGCTCAATCGAACCCTAAAG
AAGATGGGCCAAAGACCCTGA
GCCGCCATGTCCTACCCGTCCGAGGATTACGACAACGAGGCTGCATATGATCCCTATGCTTACCCTGGCGACTATGACAT
GCACACAGGAGACCCAAAGCAGGACCTAGCCTATGAACGACAATATGAGCAGCAGACCTATCAAGTAATTCCAGAAGTGA
TCAAGGATTTCATCCAATATTTCCATAAAACTGTCTCCGACCTTATCGACCAGAAAGTGTATGAGCTCCAGGCAAGCCGG
GTGTCCAGTGACGTTATCGACCAAAAGGTGTATGAGATCCAGGACATCTATGAGAACAGCTGGACCAAGCTGACTGAAAG
GTTCTTCAAGAATACCCCCTGGCCAGAAGCAGAGGCCATTGCCCCACAAGTTGGCAACGATGCTGTCTTCTTGATCCTGT
ATAAGGAACTTTATTACAGACACATCTATGCCAAAGTCAGCGGCGGGCCTTCCTTGGAACAGAGGTTTGAGTCCTATTAC
AACTACTGCAACCTTTTCAACTACATTCTCAATGCTGATGGACCTGCCCCCCTTGAACTGCCCAACCAGTGGCTGTGGGA
TATCATTGATGAATTCATCTACCAGTTTCAGTCATTCAGTCAATACCGGTGGAAGACGGCCAAAAAGTCAGATGAGGAGA
TTGACTTTCTTCGTTCCAACCCCAAGGTCTGGAATGTCCACAGCGTCCTCAATGTGCTTCATTCCCTTGTAGACAAATCC
AATATCAACCGGCAGCTAGAAGTCTATACCAGTGGAGGTGACCCTGAGAGTGTGGCTGGTGAGTATGGCCGGCACTCCCT
CTACAAGATGCTTGGCTACTTCAGCCTGGTGGGGCTGCTCCGGCTCCACTCCCTCTTGGGGGATTACTACCAGGCTATCA
AGGTGCTGGAGAACATTGAGTTGAACAAGAAGAGCATGTATTCCCGGGTGCCTGAATGCCAGGTCACCACCTATTACTAT
GTGGGGTTTGCCTACTTGATGATGCGCCGGTACCAGGATGCCATTCGTGTCTTTGCCAACATCCTGCTCTACATTCAGAG
AACCAAGAGCATGTTTCAGAGAACAACGTACAAATATGAGATGATCAACAAGCAGAATGAGCAAATGCATGCCCTGCTGG
CCATTGCCCTGACCATGTACCCCATGCGCATTGATGAGAGCATCCACCTGCAGCTCCGAGAGAAGTATGGAGACAAGATG
CTGCGCATGCAGAAGGGGGACCCCCAGGTATATGAGGAGCTCTTTAGCTACTCCTGCCCCAAGTTCCTGTCCCCCGTTGT
GCCCAACTACGACAACATGCACCCCAACTACCACAAGGAGCCCTTCCTGCAGCAGCTGAAAGTGTTTGCAGATGAGGTAC
AGCAGCAGGCCCAGCTGTCCACCATTCGCAGCTTCCTGAAGCTCTATACCACCATGCCTGTGGCCAAGCTGGCTGGTTTC
TTGGACCTCACTGAACAGGAGTTCCGTATCCAGCTGCTGGTCTTCAAACACAAGATGAAGAACCTGGTGTGGACGAGTGG
CATCTCTGCCCTGGACGGAGAGTTCCAGTCAGCCTCCGAGGTGGACTTCTACATCGACAAAGACATGATCCATATTGCAG
ATACCAAGGTGGCCCGCCGCTATGGAGACTTCTTCATCCGACAAATCCATAAATTTGAGGAGCTCAATCGAACCCTAAAG
AAGATGGGCCAAAGACCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001443 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000012225 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000005885 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000100129 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029444 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000011806 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000014352 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000010103 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000011020 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_432 | 87.20 | 89.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1247 | 89.61 | 59.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1585 | 85.48 | 63.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019068 retrocopies