Parental gene: | EIF3L, ENSPPYG00000011806 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 3, subunit L [Source:HGNC Symbol;Acc:18138] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 22:33022598..33061613(+) |
>ENSPPYG00000011806
ATGTCTTATCCCGCTGATGATTATGAGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACAC
AGGAGATCCAAAGCAGGACCTTGCTTATGAACGTCAGTATGAACAGCAAACCTATCAGGTGATCCCTGAGGTGATCAAAA
ATTTCATCCAGTATTTCCACAAAACTGTCTCAGATTTGATTGACCAGAAAGTGTATGAGCTACAGGCCAGTCGTGTCTCC
AGTGATTGGACCAAGCTGACTGAAAGATTCTTCAAGAATACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGG
CAATGATGCTGTCTTCCTGATTTTATACAAAGAATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT
TGGAGCAGAGGTTTGAATCCTATTACAACTACTGCAATCTCTTCAACTACATTCTTAATGCCGACGGTCCTGCTCCCCTT
GAACTACCCAACCAGTGGCTCTGGGATATCATCGATGAGTTCATCTACCAGTTTCAGTCATTCAGTCAGTACCGCTGTAA
GACTGCCAAGAAGTCAGAGGAGGAGATTGACTTTCTTCGTTCCAATCCGAAAATCTGGAATGTTCACAGTGTCCTCAATG
TCCTTCATTCCCTGGTAGACAAATCCAACATCAACCGACAGTTGGAGGTGTACACAAGCGGAAGTATGTATTCCCGTGTG
CCAGAGTGCCAGGTCACCACATACTATTATGTTGGGTTTGCATATTTGATGATGCGTCGCTACCAGGATGCCATCCGGGT
CTTCGCCAACATCCTCCTTTACATCCAGAGGACCAAGAGCATGTTCCAGAGGACCACGTACAAGTATGAGATGGACATGA
TCCACATCGCAGACACCAAGGTCGCCAGGCGTTATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAGCTTAAT
CGAACCCTGAAGAAGATGGGACAGAGACCTTGA
ATGTCTTATCCCGCTGATGATTATGAGTCTGAGGCGGCTTATGACCCCTACGCTTATCCCAGCGACTATGATATGCACAC
AGGAGATCCAAAGCAGGACCTTGCTTATGAACGTCAGTATGAACAGCAAACCTATCAGGTGATCCCTGAGGTGATCAAAA
ATTTCATCCAGTATTTCCACAAAACTGTCTCAGATTTGATTGACCAGAAAGTGTATGAGCTACAGGCCAGTCGTGTCTCC
AGTGATTGGACCAAGCTGACTGAAAGATTCTTCAAGAATACACCTTGGCCCGAGGCTGAAGCCATTGCTCCACAGGTTGG
CAATGATGCTGTCTTCCTGATTTTATACAAAGAATTATACTACAGGCACATATATGCCAAAGTCAGTGGGGGACCTTCCT
TGGAGCAGAGGTTTGAATCCTATTACAACTACTGCAATCTCTTCAACTACATTCTTAATGCCGACGGTCCTGCTCCCCTT
GAACTACCCAACCAGTGGCTCTGGGATATCATCGATGAGTTCATCTACCAGTTTCAGTCATTCAGTCAGTACCGCTGTAA
GACTGCCAAGAAGTCAGAGGAGGAGATTGACTTTCTTCGTTCCAATCCGAAAATCTGGAATGTTCACAGTGTCCTCAATG
TCCTTCATTCCCTGGTAGACAAATCCAACATCAACCGACAGTTGGAGGTGTACACAAGCGGAAGTATGTATTCCCGTGTG
CCAGAGTGCCAGGTCACCACATACTATTATGTTGGGTTTGCATATTTGATGATGCGTCGCTACCAGGATGCCATCCGGGT
CTTCGCCAACATCCTCCTTTACATCCAGAGGACCAAGAGCATGTTCCAGAGGACCACGTACAAGTATGAGATGGACATGA
TCCACATCGCAGACACCAAGGTCGCCAGGCGTTATGGGGATTTCTTCATCCGTCAGATCCACAAATTTGAGGAGCTTAAT
CGAACCCTGAAGAAGATGGGACAGAGACCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 38 .43 RPM |
| SRP007412_cerebellum | 56 .54 RPM |
| SRP007412_heart | 46 .75 RPM |
| SRP007412_kidney | 75 .81 RPM |
| SRP007412_liver | 53 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001443 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000019068 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000029444 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000010103 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1135 | 73.11 | 63.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1136 | 72.64 | 63.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000011806 retrocopies