Parental gene:

MMU.2663, ENSMMUG00000021366

Aliases:None
Description:peroxiredoxin-4 precursor [Source:RefSeq peptide;Acc:NP_001180740]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:21468101..21487754(+)


>ENSMMUG00000021366
ATGGAGGCGCTGCCGCTGCTAGCCGCGACAACTCCGGCCCAAGGCCGGCACCGAAGGCTGCTTCTGCTGCCGCTACTGCT
GTTCCTGCTGCCGGCTGGAGCTGTGCGGGGCTGGGAGACAGAGGACAGGCCCCGCACCCGCGAAGAGGAGTGCCACTTCT
ACGCGGGTGGACAAGTGTACCCGGGAGAGGCATCCCGGGTATCGGTCGCCGACCACTCCCTGCACCTAAGCAAAGCCAAG
ATTTCCAAGCCAGCGCCCTACTGGGAAGGAACAGCTGTGATCGATGGAGAATTTAAGGAGCTGAAGTTAACTGATTATCG
TGGGAAATACTTGGTTTTTTTCTTCTACCCACTTGATTTCACATTTGTGTGTCCAACTGAAATTATCGCTTTTGGTGATA
GACTTGAAGAATTCAGATCTATAAATACTGAAGTGGTAGCATGCTCTGTTGATTCACAGTTTACCCATTTGGCCTGGATT
AATACCCCTCGAAGACAAGGAGGACTTGGGCCAATAAGGATTCCACTTCTTTCAGATTTGACCCATCAGATCTCAAAGGA
CTATGGTGTATACCTAGAGGACTCAGGCCACACTCTTAGAGGTCTCTTCATTATTGATGACAAAGGAATCCTAAGACAAA
TTACTCTGAATGATCTTCCTGTGGGTAGATCAGTGGATGAGACACTACGTTTGGTTCAAGCATTCCAGTACACTGACAAA
CATGGAGAAGTCTGCCCTGCTGGCTGGAAACCTGGTAGTGAAACTATAATCCCAGATCCAGCTGGAAAGCTGAAGTATTT
CGATAAACTGAATTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 4 .05 RPM
SRP007412_brain 3 .47 RPM
SRP007412_cerebellum 7 .04 RPM
SRP007412_heart 13 .43 RPM
SRP007412_kidney 10 .33 RPM
SRP007412_liver 19 .24 RPM
SRP007412_testis 54 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006165 ortholog_one2one 1 retrogene
retro_btau_439,
Cavia porcellus ENSCPOG00000004185 ortholog_one2one 1 retrogene
retro_cpor_353,
Equus caballus ENSECAG00000010085 ortholog_one2one 1 retrogene
retro_ecab_576,
Homo sapiens ENSG00000123131 ortholog_one2one 1 retrogene
retro_hsap_3165,
Gorilla gorilla ENSGGOG00000026790 ortholog_one2one 1 retrogene
retro_ggor_1351,
Myotis lucifugus ENSMLUG00000004904 ortholog_one2one 2 retrogenes
retro_mluc_2347, retro_mluc_2619,
Macaca mulatta ENSMMUG00000005689 within_species_paralog 2 retrogenes
retro_mmul_1780, retro_mmul_2061,
Macaca mulatta ENSMMUG00000006221 within_species_paralog 1 retrogene
retro_mmul_762,
Macaca mulatta ENSMMUG00000008294 within_species_paralog 2 retrogenes
retro_mmul_1307, retro_mmul_1517,
Tupaia belangeri ENSTBEG00000004454 ortholog_one2one 5 retrogenes
retro_tbel_2164, retro_tbel_2467, retro_tbel_2522, retro_tbel_2811, retro_tbel_2978,
Tarsius syrichta ENSTSYG00000000602 ortholog_one2one 1 retrogene
retro_tsyr_404,
Tursiops truncatus ENSTTRG00000012368 ortholog_one2one 1 retrogene
retro_ttru_547,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2001 55.29 61.25
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Download FASTA sequences of all ENSMMUG00000021366 retrocopies