Parental gene:

PRDX4, ENSECAG00000010085

Aliases:None
Description:peroxiredoxin 4 [Source:HGNC Symbol;Acc:17169]
Organism:Horse (Equus caballus)
Coordinates:X:18023562..18041024(+)


>ENSECAG00000010085
CTGCGGGGCTGGGAGGCAGAGGAGAGGCCCCGAACCCGCGAAGAGTTTTGCCACTTCTACGCGGGTGGACAAGTATACCC
AGGGGAGGCGTCCCGGCCGGTCGCTGACCACTCCTTGCACCTCAGCAAAGCCAAGATTTCCAAGCCAGCACCTTATTGGG
AAGGAACAGCTGTGATAAATGGAGAATTTAAGGAGCTCAAGTTAACTGATTATCGTGGGAAATACCTGGTTTTTTTCTTC
TACCCACTTGATTTCACTTTTGTGTGTCCAACTGAAATTATCGCCTTTGGTGATAGAATTGAAGAATTCAGATCTATAAA
TACTGAAGTGGTAGCATGCTCTGTTGATTCACAGTTTACCCATTTGGCCTGGATTAATACCCCTCGAAGACAGGGAGGAC
TTGGGCCAATAAGGATTCCACTTCTTTCAGATTTGACCCATCAGATCTCAAAGGACTATGGCGTATATCTGGAAGACTCA
GGCCACACTCTTAGAGGTCTCTTCATTATTGATGACAAAGGAATCCTAAGACAGATTACTCTGAATGACCTTCCTGTGGG
GAGATCGGTAGATGAGACACTACGTTTGGTTCAAGCATTCCAGTACACCGACAAACATGGAGAAGTCTGCCCTGCTGGCT
GGAAACCTGGTAGTGAAACAATAATCCCAGATCCAGCTGGAAAACTGAAGTATTTCGATAAACTGAACTGA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 32 .45 RPM
SRP021940_embryo 26 .29 RPM
SRP021940_cerebellum 11 .94 RPM
SRP021940_testis 65 .48 RPM
SRP021940_placental_villous 28 .87 RPM
SRP021940_articular_cartilage 65 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006165 ortholog_one2one 1 retrogene
retro_btau_439,
Cavia porcellus ENSCPOG00000004185 ortholog_one2one 1 retrogene
retro_cpor_353,
Equus caballus ENSECAG00000008678 within_species_paralog 1 retrogene
retro_ecab_81,
Equus caballus ENSECAG00000017026 within_species_paralog 1 retrogene
retro_ecab_408,
Homo sapiens ENSG00000123131 ortholog_one2one 1 retrogene
retro_hsap_3165,
Gorilla gorilla ENSGGOG00000026790 ortholog_one2one 1 retrogene
retro_ggor_1351,
Myotis lucifugus ENSMLUG00000004904 ortholog_one2one 2 retrogenes
retro_mluc_2347, retro_mluc_2619,
Macaca mulatta ENSMMUG00000021366 ortholog_one2one 1 retrogene
retro_mmul_2001,
Tupaia belangeri ENSTBEG00000004454 ortholog_one2one 5 retrogenes
retro_tbel_2164, retro_tbel_2467, retro_tbel_2522, retro_tbel_2811, retro_tbel_2978,
Tarsius syrichta ENSTSYG00000000602 ortholog_one2one 1 retrogene
retro_tsyr_404,
Tursiops truncatus ENSTTRG00000012368 ortholog_one2one 1 retrogene
retro_ttru_547,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_576 58.09 55.51
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSECAG00000010085 retrocopies