Parental gene:

MMU.235, ENSMMUG00000008294

Aliases:None
Description:thioredoxin-dependent peroxide reductase, mitochondrial [Source:RefSeq peptide;Acc:NP_001252755]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:118789135..118800061(-)


>ENSMMUG00000008294
ATGGCGGCTGCTGTAGGAAGGTTGCTCCGAGCGTCGGTTACCCGACATGTGAGTGCCATTCCTTGGGGCATTTCTGCCAC
TGCAGCCCTCAGGCCTGCTGCATGTAGAAGAACGAGCTTGACAAACTTACTGTGTTCTGGTTCCAGTCAAGCAAAATTAT
TCAGCACCAGTTCCTCATACCACGCACCTGCTGTCACCCAGCATGCGCCCTATTTTAAGGGTACAGCCGTTGTCAATGGA
GAGTTCAAAGACCTAAGCCTTGATGACTTTAAGGGGAAATATTTGGTGCTTTTCTTCTATCCTTTGGATTTCACCTTTGT
GTGTCCTACAGAAATTGTTGCTTTTAGTGACAAAGCTAACGAATTTCACGACGTGAACTGTGAAGTTGTTGCAGTCTCAG
TGGATTCCCACTTTAGCCATCTTGCCTGGATAAATACGCCAAGAAAGAATGGTGGTTTGGGCCACATGAACATCGCACTC
TTGTCAGATTTAACTAAGCAAATTTCCCGAGACTACGGTGTGCTGTTAGAAGGTCCTGGTCTTGCACTAAGAGGTCTCTT
CATAATTGACCCCAATGGAGTCATCAAGCACTTGAGCGTCAATGATCTCCCAGTGGGCCGAAGTGTGGAAGAAACCCTCC
GCTTGGTGAAGGCGTTCCAGTATGTAGAAACCCATGGAGAAGTCTGCCCAGCGGACTGGACACCGGATTCTCCTACGATC
AAGCCAAATCCAGCTGCTTCCAAAGAGTACTTTCAGAAGGTAAATCAGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 56 .96 RPM
SRP007412_brain 65 .55 RPM
SRP007412_cerebellum 62 .06 RPM
SRP007412_heart 78 .97 RPM
SRP007412_kidney 187 .79 RPM
SRP007412_liver 84 .91 RPM
SRP007412_testis 12 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008731 ortholog_one2one 1 retrogene
retro_btau_562,
Canis familiaris ENSCAFG00000012109 ortholog_one2many 3 retrogenes
retro_cfam_1322, retro_cfam_219, retro_cfam_9,
Callithrix jacchus ENSCJAG00000019636 ortholog_one2one 3 retrogenes
retro_cjac_1333, retro_cjac_3082, retro_cjac_653,
Ciona savignyi ENSCSAVG00000001209 ortholog_one2one 1 retrogene
retro_csav_6,
Dasypus novemcinctus ENSDNOG00000001359 ortholog_one2one 3 retrogenes
retro_dnov_1052, retro_dnov_2373, retro_dnov_745,
Equus caballus ENSECAG00000017026 ortholog_one2one 1 retrogene
retro_ecab_408,
Erinaceus europaeus ENSEEUG00000009299 ortholog_one2one 1 retrogene
retro_eeur_238,
Homo sapiens ENSG00000165672 ortholog_one2one 3 retrogenes
retro_hsap_1253, retro_hsap_2587, retro_hsap_2653,
Gorilla gorilla ENSGGOG00000026364 ortholog_one2one 1 retrogene
retro_ggor_986,
Macropus eugenii ENSMEUG00000007732 ortholog_one2one 3 retrogenes
retro_meug_1219, retro_meug_1735, retro_meug_62,
Microcebus murinus ENSMICG00000007627 ortholog_one2one 1 retrogene
retro_mmur_475,
Myotis lucifugus ENSMLUG00000012871 ortholog_one2one 3 retrogenes
retro_mluc_1203, retro_mluc_1522, retro_mluc_2069,
Macaca mulatta ENSMMUG00000005689 within_species_paralog 2 retrogenes
retro_mmul_1780, retro_mmul_2061,
Macaca mulatta ENSMMUG00000006221 within_species_paralog 1 retrogene
retro_mmul_762,
Macaca mulatta ENSMMUG00000021366 within_species_paralog 1 retrogene
retro_mmul_2001,
Monodelphis domestica ENSMODG00000009286 ortholog_one2one 1 retrogene
retro_mdom_1062,
Mustela putorius furo ENSMPUG00000003074 ortholog_one2one 1 retrogene
retro_mputfur_1032,
Nomascus leucogenys ENSNLEG00000016698 ortholog_one2one 3 retrogenes
retro_nleu_1521, retro_nleu_2118, retro_nleu_2453,
Oryctolagus cuniculus ENSOCUG00000017334 ortholog_one2many 2 retrogenes
retro_ocun_135, retro_ocun_1434,
Pongo abelii ENSPPYG00000002700 ortholog_one2one 1 retrogene
retro_pabe_1906,
Pan troglodytes ENSPTRG00000002992 ortholog_one2many 1 retrogene
retro_ptro_29,
Ictidomys tridecemlineatus ENSSTOG00000002537 ortholog_one2one 2 retrogenes
retro_itri_1098, retro_itri_1753,
Tupaia belangeri ENSTBEG00000011064 ortholog_one2one 5 retrogenes
retro_tbel_3138, retro_tbel_3994, retro_tbel_710, retro_tbel_770, retro_tbel_811,
Tursiops truncatus ENSTTRG00000010878 ortholog_one2one 2 retrogenes
retro_ttru_1703, retro_ttru_881,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1307 55.61 80.25
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2. retro_mmul_1517 78.72 72.66
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Download FASTA sequences of all ENSMMUG00000008294 retrocopies