Parental gene: | MMU.2525, ENSMMUG00000019203 |
| Aliases: | TVP23B, FAM18B, FAM18B1 |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 16:15229760..15295574(-) |
>ENSMMUG00000019203
ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCCCTGTTTGATGCAGAAGAGGAGACGACTAATAGACCAAG
AAAATCCAAAATCAGACATCCAGTAGCATCATTTTTCCACTTATTCTTTCGAGTCAGTGCAATCGTCGTCTATCTTCTCT
GTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTGACAATTATCTTGTTGTTGTCGTGTGACTTTTGGGCAGTGAAG
AATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGATGGAAAGAGCCACTGGGTATTTGA
ATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAATCAAGAATCTTTTGGTTGGGACTTATTGCCT
GTCCAGTGCTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCCTTCAGAGTAAAATGGTTGGCGGTGGTTATCATGGGT
GTGGTGCTACAAGGTGCCAACCTGTATGGTTACATCAGGTGTAAGGTGGGCAGCAGAAAGAATTTAACCAGCATGGCTAC
TTCATATTTTGGAAAGCAGTTCTTACGACAAAACACTGGAGATGATCAGACTTCCTGA
ATGTTGCAGCAGGATAGTAATGATGACACTGAAGATGTTTCCCTGTTTGATGCAGAAGAGGAGACGACTAATAGACCAAG
AAAATCCAAAATCAGACATCCAGTAGCATCATTTTTCCACTTATTCTTTCGAGTCAGTGCAATCGTCGTCTATCTTCTCT
GTGAGTTGCTCAGCAGCAGCTTTATTACCTGTATGGTGACAATTATCTTGTTGTTGTCGTGTGACTTTTGGGCAGTGAAG
AATGTCACAGGTAGACTAATGGTTGGCCTACGTTGGTGGAATCACATTGATGAAGATGGAAAGAGCCACTGGGTATTTGA
ATCTAGAAAGGAGTCCTCTCAAGAGAATAAAACTGTGTCAGAGGCTGAATCAAGAATCTTTTGGTTGGGACTTATTGCCT
GTCCAGTGCTGTGGGTGATATTTGCCTTTAGTGCACTCTTCTCCTTCAGAGTAAAATGGTTGGCGGTGGTTATCATGGGT
GTGGTGCTACAAGGTGCCAACCTGTATGGTTACATCAGGTGTAAGGTGGGCAGCAGAAAGAATTTAACCAGCATGGCTAC
TTCATATTTTGGAAAGCAGTTCTTACGACAAAACACTGGAGATGATCAGACTTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 15 .39 RPM |
| SRP007412_brain | 21 .51 RPM |
| SRP007412_cerebellum | 26 .93 RPM |
| SRP007412_heart | 14 .31 RPM |
| SRP007412_kidney | 20 .77 RPM |
| SRP007412_liver | 12 .23 RPM |
| SRP007412_testis | 22 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005330 | ortholog_one2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007609 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000003854 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015098 | possible_ortholog | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002825 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014658 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000000498 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012225 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000050649 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000642 | ortholog_one2many | 6 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008082 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_278 | 93.59 | 76.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_600 | 67.86 | 67.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_748 | 95.80 | 58.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1032 | 81.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_2125 | 70.87 | 67.74 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000019203 retrocopies