Parental gene: | MMU.4022, ENSMMUG00000013766 |
| Aliases: | None |
| Description: | prostaglandin E synthase 3 [Source:RefSeq peptide;Acc:NP_001248443] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 11:53743016..53769067(-) |
>ENSMMUG00000013766
ATGCAGCCTGCTTCTGCAAAGTGGTACGATCGAAGGGACTATGTCTTCATTGAATTTTGTGTTGAAGACAGTAAGGATGT
TAATGTAAATTTTGAAAAATCCAAACTTACATTCAGTTGTCTCGGAGGAAGTGATAATTTTAAGCATTTAAATGAAATTG
ATCTTTTTCACTGTATTGATCCAAATGATTCCAAGCATAAAAGAACGGACAGATCAATTTTATGCTGTTTACGAAAAGGA
GAATCTGGCCAGTCATGGCCAAGGTTAACAAAAGAAAGGGCAAAGCTTAATTGGCTTAGTGTCGACTTCAATAATTGGAA
AGACTGGGAAGATGATTCAGATGAAGACATGTCTAATTTTGATCGTTTTTCTGAGATGATGAACAACATGGGTGGTGATG
AGGATGTAGATTTACCAGAAGTAGATGGAGCAGATGATGATTCACAAGACAGTGATGATGAAAAAATGCCAGATCTGGAG
TAA
ATGCAGCCTGCTTCTGCAAAGTGGTACGATCGAAGGGACTATGTCTTCATTGAATTTTGTGTTGAAGACAGTAAGGATGT
TAATGTAAATTTTGAAAAATCCAAACTTACATTCAGTTGTCTCGGAGGAAGTGATAATTTTAAGCATTTAAATGAAATTG
ATCTTTTTCACTGTATTGATCCAAATGATTCCAAGCATAAAAGAACGGACAGATCAATTTTATGCTGTTTACGAAAAGGA
GAATCTGGCCAGTCATGGCCAAGGTTAACAAAAGAAAGGGCAAAGCTTAATTGGCTTAGTGTCGACTTCAATAATTGGAA
AGACTGGGAAGATGATTCAGATGAAGACATGTCTAATTTTGATCGTTTTTCTGAGATGATGAACAACATGGGTGGTGATG
AGGATGTAGATTTACCAGAAGTAGATGGAGCAGATGATGATTCACAAGACAGTGATGATGAAAAAATGCCAGATCTGGAG
TAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 69 .89 RPM |
| SRP007412_brain | 96 .14 RPM |
| SRP007412_cerebellum | 103 .38 RPM |
| SRP007412_heart | 56 .65 RPM |
| SRP007412_kidney | 73 .36 RPM |
| SRP007412_liver | 52 .65 RPM |
| SRP007412_testis | 99 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000004172 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000017967 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000006514 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010724 | ortholog_one2one | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000000057 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011310 | ortholog_one2one | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000000964 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000000024 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000110958 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000027957 | ortholog_one2many | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000008268 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000001288 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015927 | ortholog_one2one | 3 retrogenes | |
| Mus musculus | ENSMUSG00000071072 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000017454 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000028667 | ortholog_one2one | 3 retrogenes | |
| Procavia capensis | ENSPCAG00000007779 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004669 | ortholog_one2many | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000005108 | ortholog_one2one | 8 retrogenes | |
| Rattus norvegicus | ENSRNOG00000002642 | ortholog_one2many | 5 retrogenes | |
| Sorex araneus | ENSSARG00000007751 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000002994 | ortholog_one2one | 15 retrogenes | |
| Tarsius syrichta | ENSTSYG00000009622 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_679 | 87.60 | 75.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_978 | 87.38 | 62.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_1054 | 74.84 | 94.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_1988 | 88.27 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_2239 | 94.38 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmul_2421 | 82.35 | 73.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000013766 retrocopies