Parental gene:

MMU.1927, ENSMMUG00000011359

Aliases:EIF3E, EIF3S6
Description:eukaryotic translation initiation factor 3, subunit E [Source:RefSeq peptide;Acc:NP_001245017]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:8:110603639..110648869(-)


>ENSMMUG00000011359
ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTCCTTGAGTTTCTCTC
TGTAAAGGAGATATATAATGAAAAGGAATTATTACAAGGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTG
CTATGGATGTATACAAAAACCTTTATTCTGATGATATTCCTCATGCTTTGAGAGAGAAAAGAACCACAGTGGTTGCACAA
CTGAAACAGCTTCAGGCAGAAACAGAACCAATTGTGAAGATGTTTGAAGATCCAGAAACTACGAGGCAAATGCAGTCAAC
CAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAGCATGGTTTTAGGCAGGAATATTTAGATACACTCTACAGAT
ATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCTGCAGAGTATCTTTATTTTTTTAGAGTGTTGGTTCCGGCA
ACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAGAATTGGGATGCAGCCATGGA
AGACCTTACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAACAGAGAACATGGC
TCATTCACTGGTCTCTGTTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGATCTCTTCCTTTATCAGCCA
CAATATCTTAATGCAATTCAGACAATGTGTCCACACATTCTTCGCTATTTGACTACAGCAGTCATAACAAACAAGGATGT
TCGGAAACGTCGGCAGGTTCTAAAAGACCTAGTTAAAGTTATTCAGCAGGAGTCTTACACATATAAAGACCCAATTACAG
AATTTGTTGAATGTTTATATGTTAACTTTGACTTCGATGGGGCTCAGAAAAAGCTGAGGGAATGTGAATCAGTGCTTGTG
AATGACTTCTTCTTGGTGGCTTGTCTTGAGGATTTCATTGAAAATGCCCGTCTCTTCATATTTGAGACTTTCTGTCGCAT
CCACCAGTGTATCAGCATTAACATGTTGGCAGATAAATTGAACATGACTCCAGAAGAAGCTGAAAGGTGGATTGTAAATT
TGATTAGAAATGCAAGACTGGATGCCAAGATTGATTCTAAATTAGGTCATGTGGTTATGGGTAACAATGCAGTCTCACCC
TATCAGCAAGTGATTGAAAAGACCAAAAGCCTTTCTTTTAGAAGCCAGATGTTGGCCATGAATATTGAGAAGAAACTTAA
CCAGAATAGCAGGTCAGAGGCTCCTAATTGGGCAACTCAAGATTCTGGCTTCTACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 28 .96 RPM
SRP007412_brain 52 .66 RPM
SRP007412_cerebellum 79 .10 RPM
SRP007412_heart 64 .24 RPM
SRP007412_kidney 74 .41 RPM
SRP007412_liver 32 .74 RPM
SRP007412_testis 97 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006702 ortholog_one2one 1 retrogene
retro_btau_291,
Canis familiaris ENSCAFG00000000702 ortholog_one2one 1 retrogene
retro_cfam_1127,
Callithrix jacchus ENSCJAG00000006458 ortholog_one2one 3 retrogenes
retro_cjac_2333, retro_cjac_2686, retro_cjac_701,
Equus caballus ENSECAG00000000236 ortholog_one2one 1 retrogene
retro_ecab_860,
Echinops telfairi ENSETEG00000013105 ortholog_one2one 1 retrogene
retro_etel_2048,
Felis catus ENSFCAG00000003665 ortholog_one2one 1 retrogene
retro_fcat_231,
Homo sapiens ENSG00000104408 ortholog_one2one 1 retrogene
retro_hsap_3489,
Gorilla gorilla ENSGGOG00000022955 ortholog_one2one 2 retrogenes
retro_ggor_2354, retro_ggor_2355,
Myotis lucifugus ENSMLUG00000007269 ortholog_one2one 1 retrogene
retro_mluc_1796,
Mustela putorius furo ENSMPUG00000005924 ortholog_one2one 2 retrogenes
retro_mputfur_193, retro_mputfur_736,
Mus musculus ENSMUSG00000022336 ortholog_one2one 2 retrogenes
retro_mmus_1801, retro_mmus_2807,
Nomascus leucogenys ENSNLEG00000004120 ortholog_one2one 1 retrogene
retro_nleu_333,
Oryctolagus cuniculus ENSOCUG00000008050 ortholog_one2one 1 retrogene
retro_ocun_1399,
Pan troglodytes ENSPTRG00000020505 ortholog_one2one 1 retrogene
retro_ptro_2362,
Rattus norvegicus ENSRNOG00000027690 ortholog_one2one 4 retrogenes
retro_rnor_1133, retro_rnor_2879, retro_rnor_583, retro_rnor_584,
Ictidomys tridecemlineatus ENSSTOG00000008976 ortholog_one2one 1 retrogene
retro_itri_545,
Tursiops truncatus ENSTTRG00000011025 ortholog_one2one 2 retrogenes
retro_ttru_1602, retro_ttru_1794,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2585 82.04 100.00
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Download FASTA sequences of all ENSMMUG00000011359 retrocopies