Parental gene:

EIF3E, ENSG00000104408

Aliases:EIF3E, EIF3-P48, EIF3S6, INT6, eIF3-p46
Description:eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277]
Organism:Human (Homo sapiens)
Coordinates:8:109213444..109447562(-)


>ENSG00000104408
ATGGCGGAGTACGACTTGACTACTCGCATCGCGCACTTTTTGGATCGGCATCTAGTCTTTCCGCTTCTTGAATTTCTCTC
TGTAAAGGAGATATATAATGAAAAGGAATTATTACAAGGTAAATTGGACCTTCTTAGTGATACCAACATGGTAGACTTTG
CTATGGATGTATACAAAAACCTTTATTCTGATGATATTCCTCATGCTTTGAGAGAGAAAAGAACCACAGTGGTTGCACAA
CTGAAACAGCTTCAGGCAGAAACAGAACCAATTGTGAAGATGTTTGAAGATCCAGAAACTACAAGGCAAATGCAGTCAAC
CAGGGATGGTAGGATGCTCTTTGACTACCTGGCGGACAAGCATGGTTTTAGGCAGGAATATTTAGATACACTCTACAGAT
ATGCAAAATTCCAGTACGAATGTGGGAATTACTCAGGAGCAGCAGAATATCTTTATTTTTTTAGAGTGCTGGTTCCAGCA
ACAGATAGAAATGCTTTAAGTTCACTCTGGGGAAAGCTGGCCTCTGAAATCTTAATGCAGAATTGGGATGCAGCCATGGA
AGACCTTACACGGTTAAAAGAGACCATAGATAATAATTCTGTGAGTTCTCCACTTCAGTCTCTTCAGCAGAGAACATGGC
TCATTCACTGGTCTCTGTTTGTTTTCTTCAATCACCCCAAAGGTCGCGATAATATTATTGACCTCTTCCTTTATCAGCCA
CAATATCTTAATGCAATTCAGACAATGTGTCCACACATTCTTCGCTATTTGACTACAGCAGTCATAACAAACAAGGATGT
TCGAAAACGTCGGCAGGTTCTAAAAGATCTAGTTAAAGTTATTCAACAGGAGTCTTACACATATAAAGACCCAATTACAG
AATTTGTTGAATGTTTATATGTTAACTTTGACTTTGATGGGGCTCAGAAAAAGCTGAGGGAATGTGAATCAGTGCTTGTG
AATGACTTCTTCTTGGTGGCTTGTCTTGAGGATTTCATTGAAAATGCCCGTCTCTTCATATTTGAGACTTTCTGTCGCAT
CCACCAGTGTATCAGCATTAACATGTTGGCAGATAAATTGAACATGACTCCAGAAGAAGCTGAAAGGTGGATTGTAAATT
TGATTAGAAATGCAAGACTGGATGCCAAGATTGATTCTAAATTAGGTCATGTGGTTATGGGTAACAATGCAGTCTCACCC
TATCAGCAAGTGATTGAAAAGACCAAAAGCCTTTCCTTTAGAAGCCAGATGTTGGCCATGAATATTGAGAAGAAACTTAA
TCAGAATAGCAGGTCAGAGGCTCCTAACTGGGCAACTCAAGATTCTGGCTTCTACTGA

Library Parental gene expression (RPM)
bodymap2_liver 90 .92 RPM
bodymap2_lung 313 .05 RPM
bodymap2_breast 290 .14 RPM
bodymap2_adipose 277 .36 RPM
bodymap2_adrenal 306 .96 RPM
bodymap2_skeletal_muscle 188 .21 RPM
bodymap2_thyroid 274 .62 RPM
bodymap2_prostate 560 .08 RPM
bodymap2_colon 585 .95 RPM
bodymap2_testis 321 .37 RPM
bodymap2_brain 110 .05 RPM
bodymap2_heart 119 .41 RPM
bodymap2_white_blood_cells 469 .46 RPM
bodymap2_lymph_node 308 .59 RPM
bodymap2_ovary 553 .65 RPM
bodymap2_kidney 154 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000006702 ortholog_one2one 1 retrogene
retro_btau_291,
Canis familiaris ENSCAFG00000000702 ortholog_one2one 1 retrogene
retro_cfam_1127,
Callithrix jacchus ENSCJAG00000006458 ortholog_one2one 3 retrogenes
retro_cjac_2333, retro_cjac_2686, retro_cjac_701,
Equus caballus ENSECAG00000000236 ortholog_one2one 1 retrogene
retro_ecab_860,
Echinops telfairi ENSETEG00000013105 ortholog_one2one 1 retrogene
retro_etel_2048,
Felis catus ENSFCAG00000003665 ortholog_one2one 1 retrogene
retro_fcat_231,
Gorilla gorilla ENSGGOG00000022955 ortholog_one2one 2 retrogenes
retro_ggor_2354, retro_ggor_2355,
Myotis lucifugus ENSMLUG00000007269 ortholog_one2one 1 retrogene
retro_mluc_1796,
Macaca mulatta ENSMMUG00000011359 ortholog_one2one 1 retrogene
retro_mmul_2585,
Mustela putorius furo ENSMPUG00000005924 ortholog_one2one 2 retrogenes
retro_mputfur_193, retro_mputfur_736,
Mus musculus ENSMUSG00000022336 ortholog_one2one 2 retrogenes
retro_mmus_1801, retro_mmus_2807,
Nomascus leucogenys ENSNLEG00000004120 ortholog_one2one 1 retrogene
retro_nleu_333,
Oryctolagus cuniculus ENSOCUG00000008050 ortholog_one2one 1 retrogene
retro_ocun_1399,
Pan troglodytes ENSPTRG00000020505 ortholog_one2one 1 retrogene
retro_ptro_2362,
Rattus norvegicus ENSRNOG00000027690 ortholog_one2one 4 retrogenes
retro_rnor_1133, retro_rnor_2879, retro_rnor_583, retro_rnor_584,
Ictidomys tridecemlineatus ENSSTOG00000008976 ortholog_one2one 1 retrogene
retro_itri_545,
Tursiops truncatus ENSTTRG00000011025 ortholog_one2one 2 retrogenes
retro_ttru_1602, retro_ttru_1794,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3489 88.98 54.83
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Download FASTA sequences of all ENSG00000104408 retrocopies