Parental gene:

MMU.4317, ENSMMUG00000003570

Aliases:None
Description:ATP synthase subunit alpha, mitochondrial [Source:RefSeq peptide;Acc:NP_001253341]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:18:39134933..39147056(-)


>ENSMMUG00000003570
ATGCTGTCCGTACGCGTTGCTGCGGCCGTGGTCCGCGCCCTCCCTCGGCGGGCCGGACTGGTCTCCAGAAATGCTTTGGG
TTCATCTTTCATTGCTGCAAGGAACCTCCATGCCTCTAACACTCATCTTCAGAAGACTGGGACTGCTGAGATGTCCTCTA
TTCTTGAAGAGCGTATTCTTGGAGCTGATATCTCTGTTGACCTTGAAGAAACTGGGCGTGTCTTAAGTATTGGTGATGGT
ATTGCCCGCGTACATGGGCTGAGGAATGTTCAGGCAGAAGAAATGGTAGAGTTTTCTTCAGGCTTAAAGGGTATGTCCTT
GAACTTGGAATCTGACAATGTTGGTGTTGTCGTGTTTGGAAATGATAAACTGATTAAGGAAGGAGATATAGTGAAGAGGA
CAGGAGCCATTGTGGACGTTCCAGTTGGTGAGGAGCTGTTGGGTCGTGTAGTTGATGCTCTTGGTAATGCTATTGATGGA
AAGGGTCCAATTGGTTCCAAGACCCGTAGGCGAGTTGGTCTGAAAGCCCCCGGTATCATTCCTCGAATTTCAGTGCGGGA
ACCAATGCAGACTGGCATTAAGGCTGTGGATAGCTTGGTGCCAATTGGTCGTGGTCAGCGTGAGCTGATTATTGGTGACC
GACAGACTGGGAAAACCTCAATTGCTATTGACACAATCATTAACCAGAAACGTTTCAATGATGGATCTGATGAAAAGAAG
AAGCTGTACTGTATCTATGTTGCTATTGGTCAAAAGAGATCCACTGTTGCCCAGTTGGTGAAGAGACTTACAGATGCAGA
TGCCATGAAGTACACCATTGTGGTGTCAGCTACAGCCTCGGATGCTGCCCCACTTCAGTACCTGGCTCCTTACTCTGGCT
GTTCCATGGGAGAGTATTTTAGAGACAATGGCAAACATGCTTTGATCATCTATGACGACTTATCCAAACAGGCTGTTGCT
TACCGTCAGATGTCTCTGTTGCTGCGCCGTCCCCCTGGTCGTGAGGCCTATCCTGGTGATGTGTTCTACCTACACTCCCG
ATTGTTGGAGAGAGCAGCCAAAATGAACGATGCTTTTGGTGGTGGCTCCTTGACTGCTTTGCCAGTTATAGAAACACAGG
CTGGTGATGTGTCTGCTTACATTCCAACGAATGTCATTTCCATCACTGACGGACAGATCTTCTTGGAAACAGAATTGTTC
TACAAAGGTATCCGCCCTGCCATTAACGTTGGTCTGTCTGTGTCTCGTGTCGGATCTGCTGCCCAAACCAGGGCTATGAA
GCAGGTGGCAGGTACCATGAAGCTGGAATTGGCTCAGTATCGTGAGGTTGCTGCTTTTGCCCAGTTTGGTTCTGACCTCG
ATGCTGCCACTCAACAACTTTTGAGTCGTGGTGTGCGTCTAACTGAGTTGCTGAAGCAAGGACAGTATTCTCCCATGGCT
ATTGAAGAACAAGTGGCTGTTATCTATGCGGGTGTAAGGGGCTATCTTGATAAACTGGAGCCCAGCAAGATTACAAAGTT
TGAGAATGCTTTCTTGTCTCATGTTATCAGCCAGCACCAAGCCCTGTTGGGTACTATCAGGGCTGATGGAAAGATCTCAG
AAGAATCAGATGCAAAGCTGAAAGAGATTGTAACAAAGTTCTTGGCTGGATTTGAAGCTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 473 .28 RPM
SRP007412_brain 454 .93 RPM
SRP007412_cerebellum 452 .28 RPM
SRP007412_heart 1046 .69 RPM
SRP007412_kidney 873 .81 RPM
SRP007412_liver 548 .43 RPM
SRP007412_testis 333 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002507 ortholog_one2one 2 retrogenes
retro_btau_1380, retro_btau_1426,
Canis familiaris ENSCAFG00000017648 possible_ortholog 2 retrogenes
retro_cfam_1483, retro_cfam_516,
Dasypus novemcinctus ENSDNOG00000006331 ortholog_one2one 2 retrogenes
retro_dnov_1740, retro_dnov_2525,
Equus caballus ENSECAG00000021561 ortholog_one2one 1 retrogene
retro_ecab_788,
Homo sapiens ENSG00000152234 ortholog_one2one 1 retrogene
retro_hsap_1702,
Gorilla gorilla ENSGGOG00000016560 ortholog_one2one 1 retrogene
retro_ggor_1275,
Macropus eugenii ENSMEUG00000009770 possible_ortholog 1 retrogene
retro_meug_151,
Meleagris gallopavo ENSMGAG00000009963 possible_ortholog 1 retrogene
retro_mgal_14,
Microcebus murinus ENSMICG00000017500 ortholog_one2one 1 retrogene
retro_mmur_1210,
Myotis lucifugus ENSMLUG00000009856 ortholog_one2one 1 retrogene
retro_mluc_1198,
Mustela putorius furo ENSMPUG00000000923 possible_ortholog 1 retrogene
retro_mputfur_601,
Nomascus leucogenys ENSNLEG00000010973 ortholog_one2one 1 retrogene
retro_nleu_1334,
Otolemur garnettii ENSOGAG00000026684 possible_ortholog 1 retrogene
retro_ogar_2623,
Pongo abelii ENSPPYG00000009130 ortholog_one2one 1 retrogene
retro_pabe_1363,
Pan troglodytes ENSPTRG00000009991 ortholog_one2one 1 retrogene
retro_ptro_1151,
Sarcophilus harrisii ENSSHAG00000017177 possible_ortholog 1 retrogene
retro_shar_109,
Tarsius syrichta ENSTSYG00000007804 ortholog_one2one 1 retrogene
retro_tsyr_1186,
Tursiops truncatus ENSTTRG00000005118 ortholog_one2one 1 retrogene
retro_ttru_159,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1208 88.91 79.93
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Download FASTA sequences of all ENSMMUG00000003570 retrocopies