Parental gene: | HNRNPK, ENSMICG00000015780 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein K [Source:HGNC Symbol;Acc:5044] |
| Organism: | Mouse Lemur (Microcebus murinus) |
| Coordinates: | GeneScaffold_3222:29003..36411(-) |
>ENSMICG00000015780
ATGGAAACCGAACAGCCAGAGGAAACCTTCCCCAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGGTCTAGAAACACTGATGAGATGGTTGAATTACGTATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACTGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGANNNNGGCCTGCAGTTGCCATCACCCAATGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAGCACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGTGAGAACACTCAAACAACAATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTCGTTCTTATTGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATTCTCGATCTTATAT
CGGAGTCTCCCATCCGTGCACAGTATGATCCATTTTACGATGAATATGATGTGTTTACAATGATGTTTGATGACGGACGC
GTAGGATTTCCAATGCGGAGAGGTGGTGACAGAATGCCTCCTGGTCGGGGTGGGCGTATGCCTCCGTCTAGAAGAGATTA
TGATGATATGAGCCCTCGTAGAGGACCACCTCCCCCTCCTCCTGGTCGAGGTGGCCGGGGTGGTAGTAGAGCTCGGAATC
TCCCTCTTCCTCCTCCACCACCTCCTAGAGGAGGAGATCTAATGGCCTATGATAGAAGAGGAAGACCTGGAGACCGCTAC
GATGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGC
TTATGAACCACAGGGAGGCTCTGGATATGATTATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTA
TT
ATGGAAACCGAACAGCCAGAGGAAACCTTCCCCAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGGTCTAGAAACACTGATGAGATGGTTGAATTACGTATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACTGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGANNNNGGCCTGCAGTTGCCATCACCCAATGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAGCACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGTGAGAACACTCAAACAACAATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTCGTTCTTATTGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATTCTCGATCTTATAT
CGGAGTCTCCCATCCGTGCACAGTATGATCCATTTTACGATGAATATGATGTGTTTACAATGATGTTTGATGACGGACGC
GTAGGATTTCCAATGCGGAGAGGTGGTGACAGAATGCCTCCTGGTCGGGGTGGGCGTATGCCTCCGTCTAGAAGAGATTA
TGATGATATGAGCCCTCGTAGAGGACCACCTCCCCCTCCTCCTGGTCGAGGTGGCCGGGGTGGTAGTAGAGCTCGGAATC
TCCCTCTTCCTCCTCCACCACCTCCTAGAGGAGGAGATCTAATGGCCTATGATAGAAGAGGAAGACCTGGAGACCGCTAC
GATGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTCTGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGC
TTATGAACCACAGGGAGGCTCTGGATATGATTATTCCTATGCAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTA
TT
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021131 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000165119 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000011651 | other_paralog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005871 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018871 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008402 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021546 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007478 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000019327 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017109 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001289 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004906 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016693 | ortholog_one2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmur_235 | 90.49 | 72.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmur_448 | 82.13 | 65.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmur_1562 | 87.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMICG00000015780 retrocopies