Parental gene: | HNRNPK, ENSBTAG00000021131 |
| Aliases: | HNRNPK, HNRPK |
| Description: | Heterogeneous nuclear ribonucleoprotein K [Source:UniProtKB/Swiss-Prot;Acc:Q3T0D0] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 8:78574697..78585938(-) |
>ENSBTAG00000021131
ATGGAAACTGAACAGCCAGAGGAAACCTTTCCCAACACTGAAACCAATGGCGAATTTGGTAAACGCCCTGCTGAAGATAT
GGAAGAGGAACAAGCTTTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACGATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGAGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACAATCAAGCTTTTCCAGGAATGTTGTCCTCA
ATCTACTGACAGAGTCGTTCTTATCGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CAGAGTCTCCCATCAAAGGACGTGCTCAGCCTTATGATCCCAATTTTTATGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCTGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCGCCTGG
TCGGGGTGGGCGTCCCATGCCTCCCTCCAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCTCCACCCCCTC
CCGGACGAGGTGGCCGGGGAGGTAGTAGAGCTCGGAATCTTCCTCTTCCACCACCACCACCACCTAGAGGAGGAGATCTA
ATGGCCTATGACAGAAGAGGAAGACCTGGAGACCGTTATGATGGCATGGTTGGTTTCAGTGCTGATGAAACCTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAGTGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCAGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACGGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
ATGGAAACTGAACAGCCAGAGGAAACCTTTCCCAACACTGAAACCAATGGCGAATTTGGTAAACGCCCTGCTGAAGATAT
GGAAGAGGAACAAGCTTTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACGATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGAGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACAATCAAGCTTTTCCAGGAATGTTGTCCTCA
ATCTACTGACAGAGTCGTTCTTATCGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CAGAGTCTCCCATCAAAGGACGTGCTCAGCCTTATGATCCCAATTTTTATGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCTGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCGCCTGG
TCGGGGTGGGCGTCCCATGCCTCCCTCCAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCTCCACCCCCTC
CCGGACGAGGTGGCCGGGGAGGTAGTAGAGCTCGGAATCTTCCTCTTCCACCACCACCACCACCTAGAGGAGGAGATCTA
ATGGCCTATGACAGAAGAGGAAGACCTGGAGACCGTTATGATGGCATGGTTGGTTTCAGTGCTGATGAAACCTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAGTGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCAGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACGGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 248 .13 RPM |
| SRP017611_kidney | 348 .52 RPM |
| SRP017611_liver | 189 .30 RPM |
| ERP005899_muscle | 323 .33 RPM |
| ERP005899_liver | 152 .70 RPM |
| SRP030211_testis | 307 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020757 | other_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000165119 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000015780 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005871 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018871 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008402 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021546 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007478 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000019327 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017109 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001289 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004906 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016693 | ortholog_one2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_468 | 81.10 | 97.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_605 | 95.00 | 68.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000021131 retrocopies