Parental gene:

ENSMEUG00000005942

Aliases:None
Description:None
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_919:6008..20856(-)


>ENSMEUG00000005942
ATGTCTATTTACAAGATCCAGGCAAGAGAGATCTTTGACTCTCGTGGAAACCCTACTGTTGAAGTTGATCTCTACACTGA
AAAAGGTCAATTCCGAGCTGCTGTGCCCAGTGGTGCTTCTACTGGTATCCATGAAGCCCTGGAACTCCGAGACAATGATA
AGACCCGCTACATGGGGAAAGGTGTCTCAAAAGCGGTTGAGCACATCAATAAAACTATTGCCCCGACCCTGATTAGCAAG
AAATTGAATGTTGTGGAGCAAGAGAAGATCGACAAATTGATGATAGAGATGGATGGCACTGAAAATAAATCTAAATTTGG
TGCAAATGCCATTTTGGGAGTGTCTCTGGCTGTTTGTAAGGCCGGAGCTGCTGAGAAAGGTGTCTCCCTGTACCGTCACA
TTGCTGACCTTGCAGGCAACGATGAAGTCATCCTGCCCGTTCCAGCCTTCAACGTGATCAATGGTGGCTCCCATGCTGGT
AACAAGTTGGCCATGCAGGAGTTCATGATCCTCCCTGTTGGAGCAGCAAACTTTAAGGAGGCCATGCGCATTGGAGCTGA
GGTCTACCACAACTTGAAGAGTGTGATTAAGCAGAAATACGGACAAGATGCCACCAACGTAGGGGATGAGGGTGGCTTTG
CTCCTAACATCCTAGAGAATAAAGAAGCTCTGGACCTGCTAAAGGATGCTATTGGTAAGGCTGGCTATACTGATAAGGTC
GTAATTGGCATGGATGTTGCTGCCTCTGAATTCTTCCGATCTGGGAAATATGATTTAGACTTCAAGTCTCCTGATGATTC
CAGCAGATACATCTCCCCTTCTGAGCTTGGGGACCTCTATAAGAGCTTCATCAAGGATTATCCAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCAAGCTGGCCCAGTCCAATGGGTGGGGAGTAATGGTTTCCCATCGTTCTG
GGGAGACTGAAGATACCTTCATTGCAGACCTGGTGGTGGGTCTCTGCACTGGGCAGATCAAGACTGGTGCCCCCTGCCGA
TCTGAGCGTCTGGCCAAGTATAACCAGCTTCTCAGAATTGAGGAAGAGCTGGGCAGCAAGGCTAAATTTGCTGGAAGGAA
CTTCAGAAACCCTCGGGCCAAGTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003483 possible_ortholog 2 retrogenes
retro_chof_1289, retro_chof_1811,
Callithrix jacchus ENSCJAG00000000359 possible_ortholog 4 retrogenes
retro_cjac_1963, retro_cjac_2238, retro_cjac_3891, retro_cjac_438,
Erinaceus europaeus ENSEEUG00000008602 ortholog_many2many 2 retrogenes
retro_eeur_23, retro_eeur_243,
Homo sapiens ENSG00000074800 possible_ortholog 1 retrogene
retro_hsap_325,
Macropus eugenii ENSMEUG00000007840 within_species_paralog 1 retrogene
retro_meug_96,
Macropus eugenii ENSMEUG00000007915 within_species_paralog 25 retrogenes
retro_meug_1019, retro_meug_1341, retro_meug_1483, retro_meug_1540, retro_meug_1566, retro_meug_1605, retro_meug_170, retro_meug_1701, retro_meug_1743, retro_meug_1869, retro_meug_1905, retro_meug_1929, retro_meug_2026, retro_meug_2190, retro_meug_235, retro_meug_269, retro_meug_578, retro_meug_607, retro_meug_637, retro_meug_803, retro_meug_820, retro_meug_906, retro_meug_965, retro_meug_973, retro_meug_976,
Monodelphis domestica ENSMODG00000009521 ortholog_many2many 1 retrogene
retro_mdom_1794,
Mustela putorius furo ENSMPUG00000006382 possible_ortholog 2 retrogenes
retro_mputfur_1162, retro_mputfur_547,
Mus musculus ENSMUSG00000063524 possible_ortholog 1 retrogene
retro_mmus_109,
Oryctolagus cuniculus ENSOCUG00000010086 possible_ortholog 1 retrogene
retro_ocun_933,
Otolemur garnettii ENSOGAG00000004001 possible_ortholog 1 retrogene
retro_ogar_1059,
Ochotona princeps ENSOPRG00000009492 possible_ortholog 1 retrogene
retro_opri_969,
Pan troglodytes ENSPTRG00000000109 possible_ortholog 1 retrogene
retro_ptro_261,
Pteropus vampyrus ENSPVAG00000005030 possible_ortholog 1 retrogene
retro_pvam_317,
Rattus norvegicus ENSRNOG00000017895 possible_ortholog 1 retrogene
retro_rnor_112,
Sarcophilus harrisii ENSSHAG00000005522 ortholog_one2many 1 retrogene
retro_shar_304,
Tarsius syrichta ENSTSYG00000002509 possible_ortholog 1 retrogene
retro_tsyr_2011,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_353 90.00 66.36
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2. retro_meug_472 94.08 66.13
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3. retro_meug_494 76.47 66.36
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4. retro_meug_652 86.60 66.36
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5. retro_meug_664 85.66 65.90
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6. retro_meug_765 96.18 66.36
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7. retro_meug_794 73.33 54.84
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8. retro_meug_874 91.63 54.61
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9. retro_meug_888 84.09 50.46
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10. retro_meug_1445 74.55 51.15
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11. retro_meug_1521 79.09 60.14
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Download FASTA sequences of all ENSMEUG00000005942 retrocopies